| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGSISSHNDMSWYREALGNQLELVSFIASGGSTYYADSVKGRFTISRDHAKNTLYLQMNSLRAEDTALYYCNSRTYDGEKTYWGQGTTVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:55)
[INFO] Main: Simulation completed successfully. (00:00:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.7009 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.1806 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1922 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.3124 | |
| 8 | G | H | -0.8624 | |
| 9 | G | H | -0.2961 | |
| 11 | G | H | 0.3262 | |
| 12 | L | H | 1.1945 | |
| 13 | V | H | 0.0025 | |
| 14 | Q | H | -1.3419 | |
| 15 | P | H | -1.5836 | |
| 16 | G | H | -1.4053 | |
| 17 | G | H | -0.9452 | |
| 18 | S | H | -0.8423 | |
| 19 | L | H | -0.4952 | |
| 20 | R | H | -1.3444 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1726 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0309 | |
| 25 | A | H | -0.3823 | |
| 26 | S | H | -0.8194 | |
| 27 | G | H | -0.8867 | |
| 28 | S | H | -0.7777 | |
| 29 | I | H | 0.0000 | |
| 30 | S | H | -1.2377 | |
| 35 | S | H | -1.0767 | |
| 36 | H | H | -1.2943 | |
| 37 | N | H | -0.9935 | |
| 38 | D | H | -0.9483 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | Y | H | 0.6511 | |
| 43 | R | H | 0.0000 | |
| 44 | E | H | -0.4614 | |
| 45 | A | H | -0.4738 | |
| 46 | L | H | 0.7443 | |
| 47 | G | H | -0.5995 | |
| 48 | N | H | -1.6210 | |
| 49 | Q | H | -1.4668 | |
| 50 | L | H | -0.0331 | |
| 51 | E | H | -0.3626 | |
| 52 | L | H | 0.8387 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | F | H | 0.8649 | |
| 56 | I | H | 0.0000 | |
| 57 | A | H | -0.6785 | |
| 58 | S | H | -1.1375 | |
| 59 | G | H | -1.0608 | |
| 63 | G | H | -0.6676 | |
| 64 | S | H | -0.2608 | |
| 65 | T | H | 0.3935 | |
| 66 | Y | H | 0.9861 | |
| 67 | Y | H | 0.0394 | |
| 68 | A | H | -0.7757 | |
| 69 | D | H | -2.2919 | |
| 70 | S | H | -1.7609 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.3786 | |
| 74 | G | H | -1.6732 | |
| 75 | R | H | -1.5423 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.5071 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3843 | |
| 80 | R | H | -1.0513 | |
| 81 | D | H | -1.5932 | |
| 82 | H | H | -1.6504 | |
| 83 | A | H | -1.3428 | |
| 84 | K | H | -2.2410 | |
| 85 | N | H | -1.6675 | |
| 86 | T | H | 0.0000 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.3956 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.8096 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.1696 | |
| 93 | S | H | -1.1773 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.1731 | |
| 96 | A | H | -1.6462 | |
| 97 | E | H | -2.2091 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3803 | |
| 100 | A | H | 0.0000 | |
| 101 | L | H | 0.4688 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.4728 | |
| 104 | C | H | 0.0000 | |
| 105 | N | H | 0.0000 | |
| 106 | S | H | 0.0000 | |
| 107 | R | H | -1.2246 | |
| 108 | T | H | -1.3858 | |
| 109 | Y | H | -1.0780 | |
| 110 | D | H | -2.1091 | |
| 113 | G | H | -2.2520 | |
| 114 | E | H | -2.8302 | |
| 115 | K | H | -2.5815 | |
| 116 | T | H | -1.1197 | |
| 117 | Y | H | -0.6983 | |
| 118 | W | H | 0.1616 | |
| 119 | G | H | -0.0128 | |
| 120 | Q | H | -0.7690 | |
| 121 | G | H | -0.1672 | |
| 122 | T | H | -0.1349 | |
| 123 | T | H | -0.0253 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.0181 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7603 | |
| 128 | S | H | -0.5678 |