| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKDGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLYNKLGDTENPTAYVHEGADDRVSYSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFHRRSGPEGHPLPADPPPSPLYVPPPASSPYAVLPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.8388 | |
| 2 | L | A | 1.6997 | |
| 3 | P | A | 0.4372 | |
| 4 | P | A | 0.1437 | |
| 5 | T | A | -0.0580 | |
| 6 | T | A | -0.0627 | |
| 7 | P | A | 0.2679 | |
| 8 | V | A | 1.1877 | |
| 9 | A | A | -0.0276 | |
| 10 | K | A | -1.1226 | |
| 11 | V | A | -0.4124 | |
| 12 | Q | A | -1.5375 | |
| 13 | S | A | -1.6085 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4237 | |
| 16 | E | A | -2.4436 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4610 | |
| 20 | P | A | 0.1086 | |
| 21 | T | A | 0.1174 | |
| 22 | S | A | -0.1680 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0898 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1473 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6499 | |
| 31 | R | A | -2.5540 | |
| 32 | L | A | -0.7120 | |
| 33 | L | A | 1.2470 | |
| 34 | T | A | 1.4689 | |
| 35 | V | A | 2.0125 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2331 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6274 | |
| 40 | K | A | -1.6526 | |
| 41 | D | A | -0.9620 | |
| 42 | I | A | 0.8039 | |
| 43 | V | A | 0.8865 | |
| 44 | K | A | -1.4371 | |
| 45 | D | A | -2.4430 | |
| 46 | G | A | -1.4856 | |
| 47 | K | A | -1.1071 | |
| 48 | V | A | 1.4146 | |
| 49 | V | A | 1.9885 | |
| 50 | V | A | 1.2903 | |
| 51 | P | A | 0.4763 | |
| 52 | K | A | -0.6279 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1454 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4716 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2622 | |
| 70 | K | A | -1.8100 | |
| 71 | F | A | -0.6684 | |
| 72 | A | A | -0.5842 | |
| 73 | L | A | -0.8752 | |
| 74 | P | A | -1.2675 | |
| 75 | Q | A | -2.4798 | |
| 76 | K | A | -3.0958 | |
| 77 | D | A | -2.9882 | |
| 78 | F | A | -1.6400 | |
| 79 | Y | A | -1.9199 | |
| 80 | D | A | -2.7576 | |
| 81 | P | A | -2.3501 | |
| 82 | E | A | -3.0726 | |
| 83 | K | A | -3.4401 | |
| 84 | E | A | -2.5010 | |
| 85 | R | A | -1.3105 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6310 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9732 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3083 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6730 | |
| 99 | G | A | -0.5377 | |
| 100 | P | A | -0.4241 | |
| 101 | L | A | -0.0017 | |
| 102 | G | A | -0.2279 | |
| 103 | K | A | -0.6429 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4414 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0858 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.2715 | |
| 110 | L | A | 0.1723 | |
| 111 | Y | A | 0.0000 | |
| 112 | N | A | -1.1681 | |
| 113 | K | A | -0.5107 | |
| 114 | L | A | -1.1000 | |
| 115 | G | A | -0.9033 | |
| 116 | D | A | -1.4684 | |
| 117 | T | A | -1.1883 | |
| 118 | E | A | -2.6679 | |
| 119 | N | A | -2.4143 | |
| 120 | P | A | -1.4159 | |
| 121 | T | A | -0.6433 | |
| 122 | A | A | -0.0075 | |
| 123 | Y | A | 0.9080 | |
| 124 | V | A | 0.0009 | |
| 125 | H | A | -0.8439 | |
| 126 | E | A | -2.3209 | |
| 127 | G | A | -2.0179 | |
| 128 | A | A | -1.5394 | |
| 129 | D | A | -2.4487 | |
| 130 | D | A | -2.0455 | |
| 131 | R | A | -1.2401 | |
| 132 | V | A | 0.0605 | |
| 133 | S | A | 0.1310 | |
| 134 | Y | A | 0.0889 | |
| 135 | S | A | -0.1525 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6661 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5692 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2830 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0860 | |
| 157 | D | A | 0.2524 | |
| 158 | L | A | 0.7355 | |
| 159 | A | A | 0.1268 | |
| 160 | E | A | -1.4590 | |
| 161 | P | A | -0.2125 | |
| 162 | C | A | 0.1893 | |
| 163 | P | A | -0.1736 | |
| 164 | G | A | -0.0802 | |
| 165 | L | A | 0.5781 | |
| 166 | P | A | -0.1199 | |
| 167 | P | A | -0.3426 | |
| 168 | G | A | -0.4473 | |
| 169 | A | A | -0.0180 | |
| 170 | C | A | 0.6689 | |
| 171 | P | A | 0.5133 | |
| 172 | P | A | 0.7442 | |
| 173 | I | A | 1.9019 | |
| 174 | Q | A | 0.7814 | |
| 175 | L | A | 1.4390 | |
| 176 | V | A | 0.8148 | |
| 177 | N | A | -0.3765 | |
| 178 | S | A | -0.0164 | |
| 179 | V | A | 0.3515 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3528 | |
| 182 | D | A | 0.0610 | |
| 183 | G | A | -0.1654 | |
| 184 | D | A | -0.5892 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1680 | |
| 190 | F | A | 0.0729 | |
| 191 | G | A | -0.0921 | |
| 192 | N | A | -0.2895 | |
| 193 | M | A | -0.1799 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4490 | |
| 197 | E | A | -2.6593 | |
| 198 | L | A | -1.2690 | |
| 199 | Q | A | -2.5539 | |
| 200 | Q | A | -3.3625 | |
| 201 | D | A | -3.6121 | |
| 202 | R | A | -3.3528 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2068 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4016 | |
| 211 | S | A | -1.9259 | |
| 212 | T | A | -1.5112 | |
| 213 | R | A | -2.2396 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1851 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2491 | |
| 220 | L | A | 0.4260 | |
| 221 | K | A | -1.4553 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -1.0097 | |
| 224 | N | A | -1.6254 | |
| 225 | E | A | -1.3603 | |
| 226 | A | A | -0.6721 | |
| 227 | Y | A | -0.4566 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7297 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1391 | |
| 234 | F | A | 0.0311 | |
| 235 | G | A | -0.9107 | |
| 236 | R | A | -2.6535 | |
| 237 | R | A | -2.9048 | |
| 238 | E | A | -2.1228 | |
| 239 | Q | A | -0.1235 | |
| 240 | V | A | 1.5603 | |
| 241 | Y | A | 1.2691 | |
| 242 | A | A | 0.1894 | |
| 243 | R | A | -1.2614 | |
| 244 | H | A | -1.2094 | |
| 245 | F | A | -0.2742 | |
| 246 | H | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.7892 | |
| 249 | S | A | -1.4418 | |
| 250 | G | A | -1.1840 | |
| 251 | P | A | -1.1517 | |
| 252 | E | A | -1.3373 | |
| 253 | G | A | -1.2642 | |
| 254 | H | A | -1.4339 | |
| 255 | P | A | -0.8357 | |
| 256 | L | A | 0.3173 | |
| 257 | P | A | -0.0663 | |
| 258 | A | A | -0.1483 | |
| 259 | D | A | -0.4597 | |
| 260 | P | A | -0.6043 | |
| 261 | P | A | -0.1608 | |
| 262 | P | A | -0.0584 | |
| 263 | S | A | 0.3325 | |
| 264 | P | A | 0.5784 | |
| 265 | L | A | 1.8023 | |
| 266 | Y | A | 1.6668 | |
| 267 | V | A | 1.8406 | |
| 268 | P | A | 0.9838 | |
| 269 | P | A | 0.8086 | |
| 270 | P | A | 0.0202 | |
| 271 | A | A | 0.1903 | |
| 272 | S | A | -0.1569 | |
| 273 | S | A | 0.3438 | |
| 274 | P | A | 0.7474 | |
| 275 | Y | A | 1.7171 | |
| 276 | A | A | 1.4447 | |
| 277 | V | A | 2.3268 | |
| 278 | L | A | 1.7302 | |
| 279 | P | A | 0.4400 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.2846 | |
| 282 | D | A | -0.9106 | |
| 283 | Y | A | 0.8130 | |
| 284 | F | A | 0.6857 | |
| 285 | G | A | 0.1253 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9617 | |
| 291 | L | A | 1.6513 | |
| 292 | V | A | 0.6527 | |
| 293 | S | A | -0.1700 | |
| 294 | S | A | -1.0005 | |
| 295 | D | A | -1.8740 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0520 | |
| 298 | L | A | -1.1814 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6665 | |
| 301 | R | A | -1.9132 | |
| 302 | P | A | -0.9687 | |
| 303 | F | A | -0.1769 | |
| 304 | W | A | -0.5135 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0788 | |
| 307 | R | A | -2.9245 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6593 | |
| 310 | G | A | -1.4290 | |
| 311 | N | A | -1.3991 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9249 | |
| 319 | N | A | -0.8966 | |
| 320 | E | A | -1.0552 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3437 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1547 | |
| 333 | N | A | 0.4050 | |
| 334 | F | A | 1.4328 | |
| 335 | T | A | 0.7179 | |
| 336 | I | A | 0.3643 | |
| 337 | S | A | -0.9755 | |
| 338 | Q | A | -1.7008 | |
| 339 | Q | A | -1.1992 | |
| 340 | L | A | 0.7063 | |
| 341 | C | A | 0.3204 | |
| 342 | T | A | -0.1869 | |
| 343 | P | A | -0.5972 | |
| 344 | E | A | -1.6088 | |
| 345 | P | A | -1.0675 | |
| 346 | N | A | -0.8631 | |
| 347 | V | A | 0.8666 | |
| 348 | Y | A | 1.0607 | |
| 349 | D | A | -0.1313 | |
| 350 | P | A | -0.3584 | |
| 351 | S | A | -0.2962 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7518 | |
| 354 | K | A | -1.7723 | |
| 355 | N | A | -1.7643 | |
| 356 | Y | A | -0.1325 | |
| 357 | L | A | 0.5548 | |
| 358 | R | A | 0.9017 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4714 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0002 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8637 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6549 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2754 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3446 | |
| 376 | L | A | -1.7955 | |
| 377 | D | A | -2.0775 | |
| 378 | P | A | -0.9352 | |
| 379 | G | A | -0.9165 | |
| 380 | V | A | -0.9313 | |
| 381 | L | A | -0.2781 | |
| 382 | A | A | 0.0000 | |
| 383 | H | A | -0.5949 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -0.3714 | |
| 386 | T | A | -0.0069 | |
| 387 | M | A | -0.1192 | |
| 388 | N | A | -0.6371 | |
| 389 | P | A | -0.9940 | |
| 390 | T | A | -1.4407 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4402 | |
| 393 | E | A | -2.8988 | |
| 394 | N | A | -2.7273 | |
| 395 | W | A | -1.5884 | |
| 396 | N | A | -1.3294 | |
| 397 | L | A | -0.3151 | |
| 398 | G | A | 0.4740 | |
| 399 | F | A | 2.4039 | |
| 400 | V | A | 1.8348 | |
| 401 | P | A | 0.0441 | |
| 402 | P | A | -1.9196 | |
| 403 | K | A | -3.4490 | |
| 404 | E | A | -3.9344 | |
| 405 | R | A | -4.2865 | |
| 406 | E | A | -3.9329 | |
| 407 | D | A | -2.9268 | |
| 408 | P | A | -1.7994 | |
| 409 | Y | A | -0.9946 | |
| 410 | K | A | -2.1053 | |
| 411 | G | A | -0.6372 | |
| 412 | L | A | 0.6516 | |
| 413 | I | A | 1.5681 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4075 | |
| 416 | E | A | -1.6929 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8621 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9080 | |
| 421 | E | A | -2.5227 | |
| 422 | R | A | -2.0347 | |
| 423 | F | A | -1.0382 | |
| 424 | S | A | -1.3242 | |
| 425 | Q | A | -1.7776 | |
| 426 | D | A | -2.8933 | |
| 427 | L | A | -1.9935 | |
| 428 | D | A | -2.7878 | |
| 429 | Q | A | -2.6179 | |
| 430 | F | A | -1.4459 | |
| 431 | A | A | -0.8778 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5902 | |
| 435 | K | A | -0.7328 | |
| 436 | F | A | 0.1568 | |
| 437 | L | A | 1.0311 | |
| 438 | Y | A | 0.8234 | |
| 439 | Q | A | -0.2683 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine