| Chain sequence(s) |
A: CCAEAEAEAEAKAKAKAK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:24)
[INFO] Main: Simulation completed successfully. (00:00:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.4406 | |
| 2 | C | A | 0.1397 | |
| 3 | A | A | -1.0783 | |
| 4 | E | A | -2.5679 | |
| 5 | A | A | -2.1187 | |
| 6 | E | A | -3.2206 | |
| 7 | A | A | -2.9841 | |
| 8 | E | A | -3.6901 | |
| 9 | A | A | -3.2159 | |
| 10 | E | A | -3.7767 | |
| 11 | A | A | -3.0427 | |
| 12 | K | A | -3.4218 | |
| 13 | A | A | -2.9198 | |
| 14 | K | A | -3.2291 | |
| 15 | A | A | -2.6674 | |
| 16 | K | A | -2.9507 | |
| 17 | A | A | -2.2398 | |
| 18 | K | A | -2.5241 |