| Chain sequence(s) |
A: CCGEWTYDDATKTFTVTE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.6012 | |
| 2 | C | A | 0.5620 | |
| 3 | G | A | -0.5838 | |
| 4 | E | A | -1.0978 | |
| 5 | W | A | 1.0108 | |
| 6 | T | A | 0.7248 | |
| 7 | Y | A | 0.3264 | |
| 8 | D | A | -1.4198 | |
| 9 | D | A | -2.4852 | |
| 10 | A | A | -1.5527 | |
| 11 | T | A | -1.3665 | |
| 12 | K | A | -2.1991 | |
| 13 | T | A | -0.3556 | |
| 14 | F | A | 1.8304 | |
| 15 | T | A | 1.2804 | |
| 16 | V | A | 1.2680 | |
| 17 | T | A | -0.3724 | |
| 18 | E | A | -1.5755 |