| Chain sequence(s) |
A: GGGGSGGGGSGGGGSGGGGSGGGGSGGGGSGGGGSGGGGSGGGGS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:03)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.8445 | |
| 2 | G | A | -1.0671 | |
| 3 | G | A | -1.1354 | |
| 4 | G | A | -1.1420 | |
| 5 | S | A | -1.0357 | |
| 6 | G | A | -1.1466 | |
| 7 | G | A | -1.1718 | |
| 8 | G | A | -1.1741 | |
| 9 | G | A | -1.1475 | |
| 10 | S | A | -1.0646 | |
| 11 | G | A | -1.1496 | |
| 12 | G | A | -1.1875 | |
| 13 | G | A | -1.1915 | |
| 14 | G | A | -1.1377 | |
| 15 | S | A | -0.9555 | |
| 16 | G | A | -1.1226 | |
| 17 | G | A | -1.1571 | |
| 18 | G | A | -1.1392 | |
| 19 | G | A | -1.1350 | |
| 20 | S | A | -1.0046 | |
| 21 | G | A | -1.1341 | |
| 22 | G | A | -1.1750 | |
| 23 | G | A | -1.1657 | |
| 24 | G | A | -1.1906 | |
| 25 | S | A | -1.0112 | |
| 26 | G | A | -1.2250 | |
| 27 | G | A | -1.2070 | |
| 28 | G | A | -1.2258 | |
| 29 | G | A | -1.1858 | |
| 30 | S | A | -1.0370 | |
| 31 | G | A | -1.2006 | |
| 32 | G | A | -1.2069 | |
| 33 | G | A | -1.2089 | |
| 34 | G | A | -1.1811 | |
| 35 | S | A | -1.0297 | |
| 36 | G | A | -1.1785 | |
| 37 | G | A | -1.1998 | |
| 38 | G | A | -1.1912 | |
| 39 | G | A | -1.1711 | |
| 40 | S | A | -1.0269 | |
| 41 | G | A | -1.1434 | |
| 42 | G | A | -1.1793 | |
| 43 | G | A | -1.1112 | |
| 44 | G | A | -0.9679 | |
| 45 | S | A | -0.5965 |