| Chain sequence(s) |
C: DIQMTQSPSSLSASVGDRVTITCKASGLPPGQGYEIAWYQQKPGKAPKVLIYGGTLPPGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCAVKNLFGKLNFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
D: EVQLVESGGGLVQPGGSLRLSCAASGSPEEIYRYYMHWVRQAPGKGLEWVGLIFGGSGQGVTIYDPKFQDRATISADNSKNTAYLQMNSLRAEDTAVYYCARARGGGFLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT input PDB |
| Selected Chain(s) | C,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:44)
[INFO] Main: Simulation completed successfully. (00:07:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | C | -2.0799 | |
| 2 | I | C | -1.2763 | |
| 3 | Q | C | -1.8435 | |
| 4 | M | C | 0.0000 | |
| 5 | T | C | -0.9473 | |
| 6 | Q | C | 0.0000 | |
| 7 | S | C | -0.4641 | |
| 8 | P | C | -0.4825 | |
| 9 | S | C | -0.8256 | |
| 10 | S | C | -0.8031 | |
| 11 | L | C | -0.6202 | |
| 12 | S | C | -1.1047 | |
| 13 | A | C | -1.1237 | |
| 14 | S | C | -0.9974 | |
| 15 | V | C | -0.0533 | |
| 16 | G | C | -0.7772 | |
| 17 | D | C | -1.8633 | |
| 18 | R | C | -2.2856 | |
| 19 | V | C | 0.0000 | |
| 20 | T | C | -0.6225 | |
| 21 | I | C | 0.0000 | |
| 22 | T | C | -0.5917 | |
| 23 | C | C | 0.0000 | |
| 24 | K | C | -1.5298 | |
| 25 | A | C | 0.0000 | |
| 26 | S | C | -1.2625 | |
| 27 | G | C | -1.2008 | |
| 28 | L | C | -0.6676 | |
| 29 | P | C | -0.6067 | |
| 30 | P | C | -0.6469 | |
| 31 | G | C | -0.6082 | |
| 32 | Q | C | -0.1087 | |
| 33 | G | C | -0.1665 | |
| 34 | Y | C | -0.0675 | |
| 35 | E | C | -0.5871 | |
| 36 | I | C | -0.4123 | |
| 37 | A | C | 0.0000 | |
| 38 | W | C | 0.0000 | |
| 39 | Y | C | 0.0000 | |
| 40 | Q | C | 0.0000 | |
| 41 | Q | C | 0.0000 | |
| 42 | K | C | -1.7094 | |
| 43 | P | C | -1.4676 | |
| 44 | G | C | -1.7570 | |
| 45 | K | C | -2.4348 | |
| 46 | A | C | -1.4915 | |
| 47 | P | C | 0.0000 | |
| 48 | K | C | -1.1650 | |
| 49 | V | C | -0.1493 | |
| 50 | L | C | 0.0000 | |
| 51 | I | C | 0.0000 | |
| 52 | Y | C | 0.0553 | |
| 53 | G | C | -0.4787 | |
| 54 | G | C | -0.6088 | |
| 55 | T | C | -0.0680 | |
| 56 | L | C | 0.3057 | |
| 57 | P | C | 0.0147 | |
| 58 | P | C | -0.3126 | |
| 59 | G | C | -0.4578 | |
| 60 | V | C | -0.1874 | |
| 61 | P | C | -0.3285 | |
| 62 | S | C | -0.3801 | |
| 63 | R | C | -0.7889 | |
| 64 | F | C | 0.0000 | |
| 65 | S | C | -0.3639 | |
| 66 | G | C | -0.4515 | |
| 67 | S | C | -0.8636 | |
| 68 | G | C | -1.3739 | |
| 69 | S | C | -1.1766 | |
| 70 | G | C | -1.1386 | |
| 71 | T | C | -1.2409 | |
| 72 | D | C | -1.8085 | |
| 73 | Y | C | 0.0000 | |
| 74 | T | C | -0.6506 | |
| 75 | L | C | 0.0000 | |
| 76 | T | C | -0.6152 | |
| 77 | I | C | 0.0000 | |
| 78 | S | C | -1.3400 | |
| 79 | S | C | -1.1668 | |
| 80 | L | C | 0.0000 | |
| 81 | Q | C | -0.8291 | |
| 82 | P | C | -1.5613 | |
| 83 | E | C | -1.8661 | |
| 84 | D | C | 0.0000 | |
| 85 | F | C | 0.0000 | |
| 86 | A | C | 0.0000 | |
| 87 | T | C | -0.8967 | |
| 88 | Y | C | 0.0000 | |
| 89 | Y | C | 0.0000 | |
| 90 | C | C | 0.0000 | |
| 91 | A | C | 0.0000 | |
| 92 | V | C | 0.0000 | |
| 93 | K | C | 0.1714 | |
| 94 | N | C | 0.0000 | |
| 95 | L | C | 1.8147 | |
| 96 | F | C | 2.2039 | |
| 97 | G | C | 0.0000 | |
| 98 | K | C | 0.4285 | |
| 99 | L | C | 0.0000 | |
| 100 | N | C | -0.4984 | |
| 101 | F | C | -0.3774 | |
| 102 | G | C | 0.0000 | |
| 103 | Q | C | -1.6432 | |
| 104 | G | C | 0.0000 | |
| 105 | T | C | 0.0000 | |
| 106 | K | C | -1.6593 | |
| 107 | V | C | 0.0000 | |
| 108 | E | C | -1.3149 | |
| 109 | I | C | 0.0000 | |
| 110 | K | C | -1.7869 | |
| 111 | R | C | -1.0767 | |
| 112 | T | C | -0.2123 | |
| 113 | V | C | 0.2851 | |
| 114 | A | C | -0.0134 | |
| 115 | A | C | -0.1052 | |
| 116 | P | C | 0.0000 | |
| 117 | S | C | -0.2060 | |
| 118 | V | C | 0.0000 | |
| 119 | F | C | 0.0000 | |
| 120 | I | C | 0.0000 | |
| 121 | F | C | 0.0000 | |
| 122 | P | C | -0.5369 | |
| 123 | P | C | 0.0000 | |
| 124 | S | C | -1.8454 | |
| 125 | D | C | -3.1397 | |
| 126 | E | C | -3.0391 | |
| 127 | Q | C | 0.0000 | |
| 128 | L | C | -2.3310 | |
| 129 | K | C | -2.8878 | |
| 130 | S | C | -1.8013 | |
| 131 | G | C | -1.2797 | |
| 132 | T | C | -1.0048 | |
| 133 | A | C | 0.0000 | |
| 134 | S | C | 0.0000 | |
| 135 | V | C | 0.0000 | |
| 136 | V | C | 0.0000 | |
| 137 | C | C | 0.0000 | |
| 138 | L | C | 0.0000 | |
| 139 | L | C | 0.0000 | |
| 140 | N | C | 0.0000 | |
| 141 | N | C | -0.8016 | |
| 142 | F | C | 0.0000 | |
| 143 | Y | C | 0.0000 | |
| 144 | P | C | -1.6994 | |
| 145 | R | C | -2.7447 | |
| 146 | E | C | -3.1007 | |
| 147 | A | C | -2.2668 | |
| 148 | K | C | -2.4379 | |
| 149 | V | C | -1.1441 | |
| 150 | Q | C | -0.7087 | |
| 151 | W | C | 0.0000 | |
| 152 | K | C | -0.5290 | |
| 153 | V | C | 0.0000 | |
| 154 | D | C | -1.8934 | |
| 155 | N | C | -1.5022 | |
| 156 | A | C | -0.2562 | |
| 157 | L | C | 0.6447 | |
| 158 | Q | C | -0.1421 | |
| 159 | S | C | -0.4222 | |
| 160 | G | C | -0.8835 | |
| 161 | N | C | -0.7966 | |
| 162 | S | C | -1.1415 | |
| 163 | Q | C | -1.4189 | |
| 164 | E | C | -1.9968 | |
| 165 | S | C | -1.0903 | |
| 166 | V | C | -0.8963 | |
| 167 | T | C | 0.0000 | |
| 168 | E | C | -2.2041 | |
| 169 | Q | C | 0.0000 | |
| 170 | D | C | -2.0423 | |
| 171 | S | C | -2.1892 | |
| 172 | K | C | -2.4714 | |
| 173 | D | C | -1.6610 | |
| 174 | S | C | 0.0000 | |
| 175 | T | C | 0.0000 | |
| 176 | Y | C | 0.0000 | |
| 177 | S | C | 0.0000 | |
| 178 | L | C | 0.0000 | |
| 179 | S | C | 0.0000 | |
| 180 | S | C | 0.0000 | |
| 181 | T | C | -0.6732 | |
| 182 | L | C | 0.0000 | |
| 183 | T | C | -0.4017 | |
| 184 | L | C | -0.5865 | |
| 185 | S | C | -0.9707 | |
| 186 | K | C | -2.0096 | |
| 187 | A | C | -1.7835 | |
| 188 | D | C | -2.3189 | |
| 189 | Y | C | 0.0000 | |
| 190 | E | C | -3.4768 | |
| 191 | K | C | -3.5737 | |
| 192 | H | C | -2.9893 | |
| 193 | K | C | -3.2489 | |
| 194 | V | C | -1.4251 | |
| 195 | Y | C | 0.0000 | |
| 196 | A | C | 0.0000 | |
| 197 | C | C | 0.0000 | |
| 198 | E | C | -0.6729 | |
| 199 | V | C | 0.0000 | |
| 200 | T | C | -1.2356 | |
| 201 | H | C | 0.0000 | |
| 202 | Q | C | -1.7337 | |
| 203 | G | C | -0.4387 | |
| 204 | L | C | -0.2431 | |
| 205 | S | C | -0.4596 | |
| 206 | S | C | -0.4212 | |
| 207 | P | C | -0.5782 | |
| 208 | V | C | 0.0991 | |
| 209 | T | C | -0.3709 | |
| 210 | K | C | -0.7535 | |
| 211 | S | C | -0.6430 | |
| 212 | F | C | 0.0000 | |
| 213 | N | C | -1.7728 | |
| 214 | R | C | -2.3916 | |
| 215 | G | C | -1.8801 | |
| 216 | E | C | -2.2741 | |
| 217 | C | C | -1.2308 | |
| 1 | E | D | -2.1952 | |
| 2 | V | D | -1.5240 | |
| 3 | Q | D | -1.5444 | |
| 4 | L | D | 0.0000 | |
| 5 | V | D | 0.3906 | |
| 6 | E | D | 0.0000 | |
| 7 | S | D | -0.5115 | |
| 8 | G | D | -0.9206 | |
| 9 | G | D | -0.4778 | |
| 10 | G | D | -0.2631 | |
| 11 | L | D | 0.0198 | |
| 12 | V | D | -0.5960 | |
| 13 | Q | D | -1.5521 | |
| 14 | P | D | -1.6591 | |
| 15 | G | D | -1.4448 | |
| 16 | G | D | -1.1829 | |
| 17 | S | D | -1.3474 | |
| 18 | L | D | -1.2111 | |
| 19 | R | D | -2.1459 | |
| 20 | L | D | 0.0000 | |
| 21 | S | D | -0.5079 | |
| 22 | C | D | 0.0000 | |
| 23 | A | D | -0.3081 | |
| 24 | A | D | 0.0000 | |
| 25 | S | D | -1.1764 | |
| 26 | G | D | -1.6166 | |
| 27 | S | D | -1.1633 | |
| 28 | P | D | -1.2553 | |
| 29 | E | D | -1.9491 | |
| 30 | E | D | 0.0000 | |
| 31 | I | D | 0.0000 | |
| 32 | Y | D | -0.3895 | |
| 33 | R | D | -1.1434 | |
| 34 | Y | D | -0.8244 | |
| 35 | Y | D | 0.1495 | |
| 36 | M | D | 0.0000 | |
| 37 | H | D | 0.0000 | |
| 38 | W | D | 0.0000 | |
| 39 | V | D | 0.0000 | |
| 40 | R | D | 0.0000 | |
| 41 | Q | D | -0.7097 | |
| 42 | A | D | -1.1543 | |
| 43 | P | D | -1.1401 | |
| 44 | G | D | -1.4473 | |
| 45 | K | D | -2.3095 | |
| 46 | G | D | -1.5010 | |
| 47 | L | D | 0.0000 | |
| 48 | E | D | -0.8246 | |
| 49 | W | D | 0.0000 | |
| 50 | V | D | 0.0000 | |
| 51 | G | D | 0.0000 | |
| 52 | L | D | 0.0000 | |
| 53 | I | D | 0.0000 | |
| 54 | F | D | 1.0660 | |
| 55 | G | D | 0.1356 | |
| 56 | G | D | 0.0000 | |
| 57 | S | D | -0.6242 | |
| 58 | G | D | -1.0031 | |
| 59 | Q | D | -1.0077 | |
| 60 | G | D | 0.1254 | |
| 61 | V | D | 1.5274 | |
| 62 | T | D | 1.1385 | |
| 63 | I | D | 0.8034 | |
| 64 | Y | D | -0.8314 | |
| 65 | D | D | -1.4164 | |
| 66 | P | D | -2.0669 | |
| 67 | K | D | -2.5776 | |
| 68 | F | D | 0.0000 | |
| 69 | Q | D | -2.6714 | |
| 70 | D | D | -2.9734 | |
| 71 | R | D | -2.1035 | |
| 72 | A | D | 0.0000 | |
| 73 | T | D | -0.9725 | |
| 74 | I | D | 0.0000 | |
| 75 | S | D | -0.1271 | |
| 76 | A | D | -0.6452 | |
| 77 | D | D | -1.4641 | |
| 78 | N | D | -1.6004 | |
| 79 | S | D | -1.6902 | |
| 80 | K | D | -2.3573 | |
| 81 | N | D | -1.6709 | |
| 82 | T | D | 0.0000 | |
| 83 | A | D | 0.0000 | |
| 84 | Y | D | 0.0000 | |
| 85 | L | D | 0.0000 | |
| 86 | Q | D | -1.2815 | |
| 87 | M | D | 0.0000 | |
| 88 | N | D | -1.6842 | |
| 89 | S | D | -1.4896 | |
| 90 | L | D | 0.0000 | |
| 91 | R | D | -2.4284 | |
| 92 | A | D | -1.7434 | |
| 93 | E | D | -2.2850 | |
| 94 | D | D | 0.0000 | |
| 95 | T | D | -0.7265 | |
| 96 | A | D | 0.0000 | |
| 97 | V | D | 0.2690 | |
| 98 | Y | D | 0.0000 | |
| 99 | Y | D | 0.0000 | |
| 100 | C | D | 0.0000 | |
| 101 | A | D | 0.0000 | |
| 102 | R | D | 0.0000 | |
| 103 | A | D | 0.0000 | |
| 104 | R | D | -2.1403 | |
| 105 | G | D | -1.0129 | |
| 106 | G | D | 0.0000 | |
| 107 | G | D | -0.3793 | |
| 108 | F | D | -0.2292 | |
| 109 | L | D | 0.0000 | |
| 110 | D | D | -0.6583 | |
| 111 | Y | D | -0.5485 | |
| 112 | W | D | -0.5066 | |
| 113 | G | D | 0.0000 | |
| 114 | Q | D | -1.4730 | |
| 115 | G | D | -0.5898 | |
| 116 | T | D | -0.0700 | |
| 117 | L | D | 0.2018 | |
| 118 | V | D | 0.0000 | |
| 119 | T | D | 0.0000 | |
| 120 | V | D | 0.0000 | |
| 121 | S | D | -0.9276 | |
| 122 | S | D | -0.6440 | |
| 123 | A | D | -0.4308 | |
| 124 | S | D | -0.5349 | |
| 125 | T | D | -0.5930 | |
| 126 | K | D | -1.1575 | |
| 127 | G | D | -1.2928 | |
| 128 | P | D | 0.0000 | |
| 129 | S | D | -0.4095 | |
| 130 | V | D | 0.0000 | |
| 131 | F | D | 0.0000 | |
| 132 | P | D | -1.3251 | |
| 133 | L | D | 0.0000 | |
| 134 | A | D | -1.2506 | |
| 135 | P | D | 0.0000 | |
| 136 | S | D | -0.9210 | |
| 137 | S | D | -0.7323 | |
| 138 | K | D | -1.0130 | |
| 139 | S | D | 0.0000 | |
| 140 | T | D | -0.6838 | |
| 141 | S | D | -0.6933 | |
| 142 | G | D | -0.7975 | |
| 143 | G | D | -0.8664 | |
| 144 | T | D | -0.6066 | |
| 145 | A | D | 0.0000 | |
| 146 | A | D | 0.0000 | |
| 147 | L | D | 0.0000 | |
| 148 | G | D | 0.0000 | |
| 149 | C | D | 0.0000 | |
| 150 | L | D | 0.0000 | |
| 151 | V | D | 0.0000 | |
| 152 | K | D | 0.0000 | |
| 153 | D | D | -0.3075 | |
| 154 | Y | D | 0.0000 | |
| 155 | F | D | 0.0000 | |
| 156 | P | D | 0.0000 | |
| 157 | E | D | -0.3944 | |
| 158 | P | D | -0.6388 | |
| 159 | V | D | -0.6381 | |
| 160 | T | D | -0.5710 | |
| 161 | V | D | -0.1811 | |
| 162 | S | D | -0.3744 | |
| 163 | W | D | 0.0000 | |
| 164 | N | D | -0.7442 | |
| 165 | S | D | -0.6411 | |
| 166 | G | D | -0.4639 | |
| 167 | A | D | -0.2086 | |
| 168 | L | D | 0.0303 | |
| 169 | T | D | -0.1543 | |
| 170 | S | D | -0.1798 | |
| 171 | G | D | -0.2133 | |
| 172 | V | D | 0.1667 | |
| 173 | H | D | -0.3194 | |
| 174 | T | D | 0.0105 | |
| 175 | F | D | 0.0000 | |
| 176 | P | D | -0.3815 | |
| 177 | A | D | 0.1881 | |
| 178 | V | D | 0.4488 | |
| 179 | L | D | 1.2014 | |
| 180 | Q | D | 0.3062 | |
| 181 | S | D | -0.0834 | |
| 182 | S | D | -0.1858 | |
| 183 | G | D | 0.0783 | |
| 184 | L | D | 0.1775 | |
| 185 | Y | D | 0.4998 | |
| 186 | S | D | 0.0000 | |
| 187 | L | D | 0.0000 | |
| 188 | S | D | 0.0000 | |
| 189 | S | D | 0.0000 | |
| 190 | V | D | 0.0000 | |
| 191 | V | D | 0.0000 | |
| 192 | T | D | -0.1364 | |
| 193 | V | D | 0.0000 | |
| 194 | P | D | -0.6033 | |
| 195 | S | D | -0.5656 | |
| 196 | S | D | -0.5688 | |
| 197 | S | D | -0.5403 | |
| 198 | L | D | -0.7406 | |
| 199 | G | D | -0.9204 | |
| 200 | T | D | -0.6539 | |
| 201 | Q | D | -1.1012 | |
| 202 | T | D | -1.0775 | |
| 203 | Y | D | 0.0000 | |
| 204 | I | D | -1.3023 | |
| 205 | C | D | 0.0000 | |
| 206 | N | D | -1.4635 | |
| 207 | V | D | 0.0000 | |
| 208 | N | D | -1.9368 | |
| 209 | H | D | 0.0000 | |
| 210 | K | D | -2.7202 | |
| 211 | P | D | -1.5434 | |
| 212 | S | D | -1.8174 | |
| 213 | N | D | -2.5694 | |
| 214 | T | D | -2.0523 | |
| 215 | K | D | -2.7031 | |
| 216 | V | D | -1.6037 | |
| 217 | D | D | -2.5300 | |
| 218 | K | D | -2.1720 | |
| 219 | K | D | -2.5442 | |
| 220 | V | D | 0.0000 | |
| 221 | E | D | -2.8747 | |
| 222 | P | D | -1.8457 | |
| 223 | K | D | -2.5482 | |
| 224 | S | D | -1.8121 | |
| 225 | C | D | -1.7368 | |
| 226 | D | D | -2.9891 | |
| 227 | K | D | -2.7927 | |
| 228 | T | D | -1.9188 | |
| 229 | H | D | -1.8923 | |
| 230 | T | D | -0.8414 |