Project name: 004

Status: done

Started: 2026-01-20 06:38:50
Settings
Chain sequence(s) C: DIQMTQSPSSLSASVGDRVTITCKASGLPPGQGYEIAWYQQKPGKAPKVLIYGGTLPPGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCAVKNLFGKLNFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
D: EVQLVESGGGLVQPGGSLRLSCAASGSPEEIYRYYMHWVRQAPGKGLEWVGLIFGGSGQGVTIYDPKFQDRATISADNSKNTAYLQMNSLRAEDTAVYYCARARGGGFLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
input PDB
Selected Chain(s) C,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:49)
Show buried residues

Minimal score value
-3.5737
Maximal score value
2.2039
Average score
-0.6941
Total score value
-310.2801

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D C -2.0799
2 I C -1.2763
3 Q C -1.8435
4 M C 0.0000
5 T C -0.9473
6 Q C 0.0000
7 S C -0.4641
8 P C -0.4825
9 S C -0.8256
10 S C -0.8031
11 L C -0.6202
12 S C -1.1047
13 A C -1.1237
14 S C -0.9974
15 V C -0.0533
16 G C -0.7772
17 D C -1.8633
18 R C -2.2856
19 V C 0.0000
20 T C -0.6225
21 I C 0.0000
22 T C -0.5917
23 C C 0.0000
24 K C -1.5298
25 A C 0.0000
26 S C -1.2625
27 G C -1.2008
28 L C -0.6676
29 P C -0.6067
30 P C -0.6469
31 G C -0.6082
32 Q C -0.1087
33 G C -0.1665
34 Y C -0.0675
35 E C -0.5871
36 I C -0.4123
37 A C 0.0000
38 W C 0.0000
39 Y C 0.0000
40 Q C 0.0000
41 Q C 0.0000
42 K C -1.7094
43 P C -1.4676
44 G C -1.7570
45 K C -2.4348
46 A C -1.4915
47 P C 0.0000
48 K C -1.1650
49 V C -0.1493
50 L C 0.0000
51 I C 0.0000
52 Y C 0.0553
53 G C -0.4787
54 G C -0.6088
55 T C -0.0680
56 L C 0.3057
57 P C 0.0147
58 P C -0.3126
59 G C -0.4578
60 V C -0.1874
61 P C -0.3285
62 S C -0.3801
63 R C -0.7889
64 F C 0.0000
65 S C -0.3639
66 G C -0.4515
67 S C -0.8636
68 G C -1.3739
69 S C -1.1766
70 G C -1.1386
71 T C -1.2409
72 D C -1.8085
73 Y C 0.0000
74 T C -0.6506
75 L C 0.0000
76 T C -0.6152
77 I C 0.0000
78 S C -1.3400
79 S C -1.1668
80 L C 0.0000
81 Q C -0.8291
82 P C -1.5613
83 E C -1.8661
84 D C 0.0000
85 F C 0.0000
86 A C 0.0000
87 T C -0.8967
88 Y C 0.0000
89 Y C 0.0000
90 C C 0.0000
91 A C 0.0000
92 V C 0.0000
93 K C 0.1714
94 N C 0.0000
95 L C 1.8147
96 F C 2.2039
97 G C 0.0000
98 K C 0.4285
99 L C 0.0000
100 N C -0.4984
101 F C -0.3774
102 G C 0.0000
103 Q C -1.6432
104 G C 0.0000
105 T C 0.0000
106 K C -1.6593
107 V C 0.0000
108 E C -1.3149
109 I C 0.0000
110 K C -1.7869
111 R C -1.0767
112 T C -0.2123
113 V C 0.2851
114 A C -0.0134
115 A C -0.1052
116 P C 0.0000
117 S C -0.2060
118 V C 0.0000
119 F C 0.0000
120 I C 0.0000
121 F C 0.0000
122 P C -0.5369
123 P C 0.0000
124 S C -1.8454
125 D C -3.1397
126 E C -3.0391
127 Q C 0.0000
128 L C -2.3310
129 K C -2.8878
130 S C -1.8013
131 G C -1.2797
132 T C -1.0048
133 A C 0.0000
134 S C 0.0000
135 V C 0.0000
136 V C 0.0000
137 C C 0.0000
138 L C 0.0000
139 L C 0.0000
140 N C 0.0000
141 N C -0.8016
142 F C 0.0000
143 Y C 0.0000
144 P C -1.6994
145 R C -2.7447
146 E C -3.1007
147 A C -2.2668
148 K C -2.4379
149 V C -1.1441
150 Q C -0.7087
151 W C 0.0000
152 K C -0.5290
153 V C 0.0000
154 D C -1.8934
155 N C -1.5022
156 A C -0.2562
157 L C 0.6447
158 Q C -0.1421
159 S C -0.4222
160 G C -0.8835
161 N C -0.7966
162 S C -1.1415
163 Q C -1.4189
164 E C -1.9968
165 S C -1.0903
166 V C -0.8963
167 T C 0.0000
168 E C -2.2041
169 Q C 0.0000
170 D C -2.0423
171 S C -2.1892
172 K C -2.4714
173 D C -1.6610
174 S C 0.0000
175 T C 0.0000
176 Y C 0.0000
177 S C 0.0000
178 L C 0.0000
179 S C 0.0000
180 S C 0.0000
181 T C -0.6732
182 L C 0.0000
183 T C -0.4017
184 L C -0.5865
185 S C -0.9707
186 K C -2.0096
187 A C -1.7835
188 D C -2.3189
189 Y C 0.0000
190 E C -3.4768
191 K C -3.5737
192 H C -2.9893
193 K C -3.2489
194 V C -1.4251
195 Y C 0.0000
196 A C 0.0000
197 C C 0.0000
198 E C -0.6729
199 V C 0.0000
200 T C -1.2356
201 H C 0.0000
202 Q C -1.7337
203 G C -0.4387
204 L C -0.2431
205 S C -0.4596
206 S C -0.4212
207 P C -0.5782
208 V C 0.0991
209 T C -0.3709
210 K C -0.7535
211 S C -0.6430
212 F C 0.0000
213 N C -1.7728
214 R C -2.3916
215 G C -1.8801
216 E C -2.2741
217 C C -1.2308
1 E D -2.1952
2 V D -1.5240
3 Q D -1.5444
4 L D 0.0000
5 V D 0.3906
6 E D 0.0000
7 S D -0.5115
8 G D -0.9206
9 G D -0.4778
10 G D -0.2631
11 L D 0.0198
12 V D -0.5960
13 Q D -1.5521
14 P D -1.6591
15 G D -1.4448
16 G D -1.1829
17 S D -1.3474
18 L D -1.2111
19 R D -2.1459
20 L D 0.0000
21 S D -0.5079
22 C D 0.0000
23 A D -0.3081
24 A D 0.0000
25 S D -1.1764
26 G D -1.6166
27 S D -1.1633
28 P D -1.2553
29 E D -1.9491
30 E D 0.0000
31 I D 0.0000
32 Y D -0.3895
33 R D -1.1434
34 Y D -0.8244
35 Y D 0.1495
36 M D 0.0000
37 H D 0.0000
38 W D 0.0000
39 V D 0.0000
40 R D 0.0000
41 Q D -0.7097
42 A D -1.1543
43 P D -1.1401
44 G D -1.4473
45 K D -2.3095
46 G D -1.5010
47 L D 0.0000
48 E D -0.8246
49 W D 0.0000
50 V D 0.0000
51 G D 0.0000
52 L D 0.0000
53 I D 0.0000
54 F D 1.0660
55 G D 0.1356
56 G D 0.0000
57 S D -0.6242
58 G D -1.0031
59 Q D -1.0077
60 G D 0.1254
61 V D 1.5274
62 T D 1.1385
63 I D 0.8034
64 Y D -0.8314
65 D D -1.4164
66 P D -2.0669
67 K D -2.5776
68 F D 0.0000
69 Q D -2.6714
70 D D -2.9734
71 R D -2.1035
72 A D 0.0000
73 T D -0.9725
74 I D 0.0000
75 S D -0.1271
76 A D -0.6452
77 D D -1.4641
78 N D -1.6004
79 S D -1.6902
80 K D -2.3573
81 N D -1.6709
82 T D 0.0000
83 A D 0.0000
84 Y D 0.0000
85 L D 0.0000
86 Q D -1.2815
87 M D 0.0000
88 N D -1.6842
89 S D -1.4896
90 L D 0.0000
91 R D -2.4284
92 A D -1.7434
93 E D -2.2850
94 D D 0.0000
95 T D -0.7265
96 A D 0.0000
97 V D 0.2690
98 Y D 0.0000
99 Y D 0.0000
100 C D 0.0000
101 A D 0.0000
102 R D 0.0000
103 A D 0.0000
104 R D -2.1403
105 G D -1.0129
106 G D 0.0000
107 G D -0.3793
108 F D -0.2292
109 L D 0.0000
110 D D -0.6583
111 Y D -0.5485
112 W D -0.5066
113 G D 0.0000
114 Q D -1.4730
115 G D -0.5898
116 T D -0.0700
117 L D 0.2018
118 V D 0.0000
119 T D 0.0000
120 V D 0.0000
121 S D -0.9276
122 S D -0.6440
123 A D -0.4308
124 S D -0.5349
125 T D -0.5930
126 K D -1.1575
127 G D -1.2928
128 P D 0.0000
129 S D -0.4095
130 V D 0.0000
131 F D 0.0000
132 P D -1.3251
133 L D 0.0000
134 A D -1.2506
135 P D 0.0000
136 S D -0.9210
137 S D -0.7323
138 K D -1.0130
139 S D 0.0000
140 T D -0.6838
141 S D -0.6933
142 G D -0.7975
143 G D -0.8664
144 T D -0.6066
145 A D 0.0000
146 A D 0.0000
147 L D 0.0000
148 G D 0.0000
149 C D 0.0000
150 L D 0.0000
151 V D 0.0000
152 K D 0.0000
153 D D -0.3075
154 Y D 0.0000
155 F D 0.0000
156 P D 0.0000
157 E D -0.3944
158 P D -0.6388
159 V D -0.6381
160 T D -0.5710
161 V D -0.1811
162 S D -0.3744
163 W D 0.0000
164 N D -0.7442
165 S D -0.6411
166 G D -0.4639
167 A D -0.2086
168 L D 0.0303
169 T D -0.1543
170 S D -0.1798
171 G D -0.2133
172 V D 0.1667
173 H D -0.3194
174 T D 0.0105
175 F D 0.0000
176 P D -0.3815
177 A D 0.1881
178 V D 0.4488
179 L D 1.2014
180 Q D 0.3062
181 S D -0.0834
182 S D -0.1858
183 G D 0.0783
184 L D 0.1775
185 Y D 0.4998
186 S D 0.0000
187 L D 0.0000
188 S D 0.0000
189 S D 0.0000
190 V D 0.0000
191 V D 0.0000
192 T D -0.1364
193 V D 0.0000
194 P D -0.6033
195 S D -0.5656
196 S D -0.5688
197 S D -0.5403
198 L D -0.7406
199 G D -0.9204
200 T D -0.6539
201 Q D -1.1012
202 T D -1.0775
203 Y D 0.0000
204 I D -1.3023
205 C D 0.0000
206 N D -1.4635
207 V D 0.0000
208 N D -1.9368
209 H D 0.0000
210 K D -2.7202
211 P D -1.5434
212 S D -1.8174
213 N D -2.5694
214 T D -2.0523
215 K D -2.7031
216 V D -1.6037
217 D D -2.5300
218 K D -2.1720
219 K D -2.5442
220 V D 0.0000
221 E D -2.8747
222 P D -1.8457
223 K D -2.5482
224 S D -1.8121
225 C D -1.7368
226 D D -2.9891
227 K D -2.7927
228 T D -1.9188
229 H D -1.8923
230 T D -0.8414
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Laboratory of Theory of Biopolymers 2018