Project name: c388b28652a1467

Status: done

Started: 2026-06-27 15:18:20
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Chain sequence(s) A: QQKFQFQFEQQ
C: QQKFQFQFEQQ
B: QQKFQFQFEQQ
E: QQKFQFQFEQQ
D: QQKFQFQFEQQ
G: QQKFQFQFEQQ
F: QQKFQFQFEQQ
H: QQKFQFQFEQQ
input PDB
Selected Chain(s) A,C,B,E,D,G,F,H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:19)
Show buried residues

Minimal score value
-2.909
Maximal score value
0.9489
Average score
-1.3973
Total score value
-122.9585

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -2.1670
2 Q A 0.0000
3 K A -2.3409
4 F A 0.0000
5 Q A -1.2841
6 F A 0.0000
7 Q A -1.4353
8 F A 0.0000
9 E A -2.0017
10 Q A -1.9274
11 Q A -2.4045
1 Q B -2.2022
2 Q B -1.8223
3 K B -1.9289
4 F B 0.1467
5 Q B -0.6520
6 F B 0.8597
7 Q B -0.9861
8 F B -0.6743
9 E B -2.6936
10 Q B -2.4857
11 Q B -2.3912
1 Q C -2.1534
2 Q C -1.8207
3 K C -1.7636
4 F C -0.2891
5 Q C -1.1900
6 F C -0.3763
7 Q C -1.7772
8 F C -1.2998
9 E C -2.8805
10 Q C -2.6395
11 Q C -2.4401
1 Q D -2.2975
2 Q D 0.0000
3 K D -2.5064
4 F D 0.0000
5 Q D -1.8207
6 F D 0.0000
7 Q D -1.4192
8 F D 0.0000
9 E D -1.9746
10 Q D -1.9355
11 Q D -2.3810
1 Q E -2.2867
2 Q E 0.0000
3 K E -2.5286
4 F E 0.0000
5 Q E -1.2405
6 F E 0.0000
7 Q E -1.2468
8 F E 0.0000
9 E E -2.0700
10 Q E -1.9291
11 Q E -2.3850
1 Q F -2.1679
2 Q F -1.8294
3 K F -1.7988
4 F F 0.0193
5 Q F -0.6278
6 F F 0.9489
7 Q F -0.9672
8 F F -0.7854
9 E F -2.9090
10 Q F -2.6062
11 Q F -2.4689
1 Q G -2.2194
2 Q G -1.9696
3 K G -2.1066
4 F G -0.5510
5 Q G -1.4672
6 F G -0.4874
7 Q G -1.7599
8 F G -1.0542
9 E G -2.1852
10 Q G -2.1428
11 Q G -2.1907
1 Q H -2.0949
2 Q H 0.0000
3 K H -2.4466
4 F H 0.0000
5 Q H -2.0279
6 F H 0.0000
7 Q H -1.6880
8 F H 0.0000
9 E H -2.0096
10 Q H -1.9559
11 Q H -2.3666
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Laboratory of Theory of Biopolymers 2018