| Chain sequence(s) |
A: QQKFQFQFEQQ
C: QQKFQFQFEQQ B: QQKFQFQFEQQ E: QQKFQFQFEQQ D: QQKFQFQFEQQ G: QQKFQFQFEQQ F: QQKFQFQFEQQ H: QQKFQFQFEQQ input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:17)
[INFO] Main: Simulation completed successfully. (00:04:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -2.1670 | |
| 2 | Q | A | 0.0000 | |
| 3 | K | A | -2.3409 | |
| 4 | F | A | 0.0000 | |
| 5 | Q | A | -1.2841 | |
| 6 | F | A | 0.0000 | |
| 7 | Q | A | -1.4353 | |
| 8 | F | A | 0.0000 | |
| 9 | E | A | -2.0017 | |
| 10 | Q | A | -1.9274 | |
| 11 | Q | A | -2.4045 | |
| 1 | Q | B | -2.2022 | |
| 2 | Q | B | -1.8223 | |
| 3 | K | B | -1.9289 | |
| 4 | F | B | 0.1467 | |
| 5 | Q | B | -0.6520 | |
| 6 | F | B | 0.8597 | |
| 7 | Q | B | -0.9861 | |
| 8 | F | B | -0.6743 | |
| 9 | E | B | -2.6936 | |
| 10 | Q | B | -2.4857 | |
| 11 | Q | B | -2.3912 | |
| 1 | Q | C | -2.1534 | |
| 2 | Q | C | -1.8207 | |
| 3 | K | C | -1.7636 | |
| 4 | F | C | -0.2891 | |
| 5 | Q | C | -1.1900 | |
| 6 | F | C | -0.3763 | |
| 7 | Q | C | -1.7772 | |
| 8 | F | C | -1.2998 | |
| 9 | E | C | -2.8805 | |
| 10 | Q | C | -2.6395 | |
| 11 | Q | C | -2.4401 | |
| 1 | Q | D | -2.2975 | |
| 2 | Q | D | 0.0000 | |
| 3 | K | D | -2.5064 | |
| 4 | F | D | 0.0000 | |
| 5 | Q | D | -1.8207 | |
| 6 | F | D | 0.0000 | |
| 7 | Q | D | -1.4192 | |
| 8 | F | D | 0.0000 | |
| 9 | E | D | -1.9746 | |
| 10 | Q | D | -1.9355 | |
| 11 | Q | D | -2.3810 | |
| 1 | Q | E | -2.2867 | |
| 2 | Q | E | 0.0000 | |
| 3 | K | E | -2.5286 | |
| 4 | F | E | 0.0000 | |
| 5 | Q | E | -1.2405 | |
| 6 | F | E | 0.0000 | |
| 7 | Q | E | -1.2468 | |
| 8 | F | E | 0.0000 | |
| 9 | E | E | -2.0700 | |
| 10 | Q | E | -1.9291 | |
| 11 | Q | E | -2.3850 | |
| 1 | Q | F | -2.1679 | |
| 2 | Q | F | -1.8294 | |
| 3 | K | F | -1.7988 | |
| 4 | F | F | 0.0193 | |
| 5 | Q | F | -0.6278 | |
| 6 | F | F | 0.9489 | |
| 7 | Q | F | -0.9672 | |
| 8 | F | F | -0.7854 | |
| 9 | E | F | -2.9090 | |
| 10 | Q | F | -2.6062 | |
| 11 | Q | F | -2.4689 | |
| 1 | Q | G | -2.2194 | |
| 2 | Q | G | -1.9696 | |
| 3 | K | G | -2.1066 | |
| 4 | F | G | -0.5510 | |
| 5 | Q | G | -1.4672 | |
| 6 | F | G | -0.4874 | |
| 7 | Q | G | -1.7599 | |
| 8 | F | G | -1.0542 | |
| 9 | E | G | -2.1852 | |
| 10 | Q | G | -2.1428 | |
| 11 | Q | G | -2.1907 | |
| 1 | Q | H | -2.0949 | |
| 2 | Q | H | 0.0000 | |
| 3 | K | H | -2.4466 | |
| 4 | F | H | 0.0000 | |
| 5 | Q | H | -2.0279 | |
| 6 | F | H | 0.0000 | |
| 7 | Q | H | -1.6880 | |
| 8 | F | H | 0.0000 | |
| 9 | E | H | -2.0096 | |
| 10 | Q | H | -1.9559 | |
| 11 | Q | H | -2.3666 |