| Chain sequence(s) |
A: RGVPHIVMVDAYKRYKGGSGGSGGSGGSGFRFDMMGDHDAEAIEGPGPGDQAIKYKETLNFPLLSGPGPGKTEISAELAADIDATFGPGPGPIKLPILMYHAIHVMAPEEEGPGPGTDGGYGHVAYVTDVAANGHIQVGPGPGQGQVDAIVSEQAKLTEENTRGPGPGCIRINYFRTDGNYDQKGPGPGAVTNGGGLRATIAKDQPVTKGSGHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:03)
[INFO] Main: Simulation completed successfully. (00:03:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -1.8579 | |
| 2 | G | A | -1.0199 | |
| 3 | V | A | 0.1630 | |
| 4 | P | A | 0.0369 | |
| 5 | H | A | -0.0356 | |
| 6 | I | A | 0.2273 | |
| 7 | V | A | -0.0022 | |
| 8 | M | A | 0.0000 | |
| 9 | V | A | 0.0000 | |
| 10 | D | A | 0.0000 | |
| 11 | A | A | 0.0000 | |
| 12 | Y | A | -0.7971 | |
| 13 | K | A | -2.4202 | |
| 14 | R | A | -2.3362 | |
| 15 | Y | A | -1.8623 | |
| 16 | K | A | -2.6162 | |
| 17 | G | A | -2.2588 | |
| 18 | G | A | 0.0000 | |
| 19 | S | A | -1.8788 | |
| 20 | G | A | -1.3628 | |
| 21 | G | A | -1.1817 | |
| 22 | S | A | -0.9119 | |
| 23 | G | A | -1.7437 | |
| 24 | G | A | -1.3670 | |
| 25 | S | A | -1.4482 | |
| 26 | G | A | -1.6496 | |
| 27 | G | A | -1.7690 | |
| 28 | S | A | -1.3918 | |
| 29 | G | A | -1.2972 | |
| 30 | F | A | 0.0000 | |
| 31 | R | A | -1.6077 | |
| 32 | F | A | 0.0000 | |
| 33 | D | A | -1.4542 | |
| 34 | M | A | -0.3550 | |
| 35 | M | A | -0.1869 | |
| 36 | G | A | -2.0232 | |
| 37 | D | A | -2.9418 | |
| 38 | H | A | -3.4677 | |
| 39 | D | A | -3.3847 | |
| 40 | A | A | -2.5446 | |
| 41 | E | A | -3.4231 | |
| 42 | A | A | -1.6832 | |
| 43 | I | A | -0.5064 | |
| 44 | E | A | -2.1969 | |
| 45 | G | A | -1.4789 | |
| 46 | P | A | -1.2138 | |
| 47 | G | A | -1.5293 | |
| 48 | P | A | -1.8642 | |
| 49 | G | A | -1.7374 | |
| 50 | D | A | -2.4968 | |
| 51 | Q | A | -2.2908 | |
| 52 | A | A | -1.6401 | |
| 53 | I | A | -1.8498 | |
| 54 | K | A | -2.5901 | |
| 55 | Y | A | -0.8780 | |
| 56 | K | A | -1.9602 | |
| 57 | E | A | -2.6295 | |
| 58 | T | A | -1.6412 | |
| 59 | L | A | 0.0000 | |
| 60 | N | A | -1.8525 | |
| 61 | F | A | 0.0000 | |
| 62 | P | A | -1.2059 | |
| 63 | L | A | 0.0000 | |
| 64 | L | A | 0.0000 | |
| 65 | S | A | -0.8496 | |
| 66 | G | A | -1.1003 | |
| 67 | P | A | -0.7784 | |
| 68 | G | A | -1.6690 | |
| 69 | P | A | -1.2751 | |
| 70 | G | A | -1.7331 | |
| 71 | K | A | -2.6030 | |
| 72 | T | A | -1.9914 | |
| 73 | E | A | -2.1059 | |
| 74 | I | A | 0.0000 | |
| 75 | S | A | -1.0723 | |
| 76 | A | A | -1.2406 | |
| 77 | E | A | -2.6437 | |
| 78 | L | A | 0.0000 | |
| 79 | A | A | -1.5417 | |
| 80 | A | A | -2.0448 | |
| 81 | D | A | -2.8632 | |
| 82 | I | A | 0.0000 | |
| 83 | D | A | -2.5925 | |
| 84 | A | A | -1.6760 | |
| 85 | T | A | -1.4410 | |
| 86 | F | A | 0.0000 | |
| 87 | G | A | -1.2707 | |
| 88 | P | A | -1.2657 | |
| 89 | G | A | -0.9832 | |
| 90 | P | A | -0.8952 | |
| 91 | G | A | -0.7502 | |
| 92 | P | A | -0.2302 | |
| 93 | I | A | 0.4565 | |
| 94 | K | A | -0.5914 | |
| 95 | L | A | 0.0000 | |
| 96 | P | A | -0.3666 | |
| 97 | I | A | 0.0000 | |
| 98 | L | A | 0.0000 | |
| 99 | M | A | 0.0751 | |
| 100 | Y | A | 0.0000 | |
| 101 | H | A | -0.2369 | |
| 102 | A | A | 0.0000 | |
| 103 | I | A | 0.0000 | |
| 104 | H | A | -0.1002 | |
| 105 | V | A | -0.0465 | |
| 106 | M | A | -0.8238 | |
| 107 | A | A | -1.4953 | |
| 108 | P | A | -2.1021 | |
| 109 | E | A | -3.2834 | |
| 110 | E | A | -3.7273 | |
| 111 | E | A | -3.5208 | |
| 112 | G | A | -2.6637 | |
| 113 | P | A | -1.5525 | |
| 114 | G | A | -1.6714 | |
| 115 | P | A | -1.1168 | |
| 116 | G | A | -1.2538 | |
| 117 | T | A | -1.3784 | |
| 118 | D | A | -2.1827 | |
| 119 | G | A | -1.2171 | |
| 120 | G | A | -1.3212 | |
| 121 | Y | A | 0.1353 | |
| 122 | G | A | -0.8695 | |
| 123 | H | A | -0.7175 | |
| 124 | V | A | -0.4439 | |
| 125 | A | A | -0.3889 | |
| 126 | Y | A | -0.2970 | |
| 127 | V | A | 0.0000 | |
| 128 | T | A | -0.1803 | |
| 129 | D | A | -0.5315 | |
| 130 | V | A | -0.0589 | |
| 131 | A | A | -0.2925 | |
| 132 | A | A | -0.5522 | |
| 133 | N | A | -1.4564 | |
| 134 | G | A | -1.2460 | |
| 135 | H | A | -0.9665 | |
| 136 | I | A | -0.4380 | |
| 137 | Q | A | -0.5943 | |
| 138 | V | A | 0.0000 | |
| 139 | G | A | -0.3627 | |
| 140 | P | A | -0.8002 | |
| 141 | G | A | -0.9616 | |
| 142 | P | A | -0.9240 | |
| 143 | G | A | 0.0000 | |
| 144 | Q | A | -1.8235 | |
| 145 | G | A | -1.4981 | |
| 146 | Q | A | -1.1214 | |
| 147 | V | A | 0.0000 | |
| 148 | D | A | -2.4157 | |
| 149 | A | A | -1.5571 | |
| 150 | I | A | -1.5472 | |
| 151 | V | A | -1.6906 | |
| 152 | S | A | -1.8448 | |
| 153 | E | A | -2.7224 | |
| 154 | Q | A | -2.5923 | |
| 155 | A | A | 0.0000 | |
| 156 | K | A | -2.9094 | |
| 157 | L | A | 0.0000 | |
| 158 | T | A | -2.6868 | |
| 159 | E | A | -3.3125 | |
| 160 | E | A | -3.7867 | |
| 161 | N | A | -3.5190 | |
| 162 | T | A | -2.4858 | |
| 163 | R | A | -3.0759 | |
| 164 | G | A | -2.4929 | |
| 165 | P | A | -1.3245 | |
| 166 | G | A | -1.3679 | |
| 167 | P | A | -1.2716 | |
| 168 | G | A | -1.3281 | |
| 169 | C | A | -0.9339 | |
| 170 | I | A | 0.0000 | |
| 171 | R | A | 0.0000 | |
| 172 | I | A | 0.0000 | |
| 173 | N | A | 0.0000 | |
| 174 | Y | A | 0.0000 | |
| 175 | F | A | -0.2027 | |
| 176 | R | A | -0.9746 | |
| 177 | T | A | -0.8726 | |
| 178 | D | A | -1.0157 | |
| 179 | G | A | 0.0000 | |
| 180 | N | A | 0.0000 | |
| 181 | Y | A | 0.2217 | |
| 182 | D | A | -0.3647 | |
| 183 | Q | A | 0.0000 | |
| 184 | K | A | 0.0000 | |
| 185 | G | A | -0.7306 | |
| 186 | P | A | -0.5054 | |
| 187 | G | A | -0.7631 | |
| 188 | P | A | -0.6697 | |
| 189 | G | A | -1.0478 | |
| 190 | A | A | -1.0804 | |
| 191 | V | A | 0.0000 | |
| 192 | T | A | -1.7064 | |
| 193 | N | A | -2.0893 | |
| 194 | G | A | -1.5069 | |
| 195 | G | A | -1.6582 | |
| 196 | G | A | -1.7433 | |
| 197 | L | A | 0.0000 | |
| 198 | R | A | -2.6900 | |
| 199 | A | A | -0.8677 | |
| 200 | T | A | -0.2106 | |
| 201 | I | A | -0.0108 | |
| 202 | A | A | -0.6931 | |
| 203 | K | A | -1.5727 | |
| 204 | D | A | 0.0000 | |
| 205 | Q | A | -2.1769 | |
| 206 | P | A | -1.5592 | |
| 207 | V | A | -1.2894 | |
| 208 | T | A | -2.0888 | |
| 209 | K | A | -2.3370 | |
| 210 | G | A | -1.6914 | |
| 211 | S | A | -1.4404 | |
| 212 | G | A | -1.8192 | |
| 213 | H | A | -2.0590 | |
| 214 | H | A | -2.2324 | |
| 215 | H | A | -1.9824 | |
| 216 | H | A | -1.9222 | |
| 217 | H | A | -1.6721 | |
| 218 | H | A | -1.8911 |