| Chain sequence(s) |
A: GGGHKGG
C: GGGHKGG B: GGGHKGG E: GGGHKGG D: GGGHKGG G: GGGHKGG F: GGGHKGG I: GGGHKGG H: GGGHKGG K: GGGHKGG J: GGGHKGG M: GGGHKGG L: GGGHKGG O: GGGHKGG N: GGGHKGG Q: GGGHKGG P: GGGHKGG S: GGGHKGG R: GGGHKGG T: GGGHKGG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:06)
[INFO] Main: Simulation completed successfully. (00:02:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.9801 | |
| 2 | G | A | -2.6855 | |
| 3 | G | A | -2.9340 | |
| 4 | H | A | -3.6893 | |
| 5 | K | A | -3.3963 | |
| 6 | G | A | -2.1194 | |
| 7 | G | A | -1.6440 | |
| 1 | G | B | -1.5601 | |
| 2 | G | B | -1.9624 | |
| 3 | G | B | -2.7354 | |
| 4 | H | B | -2.9906 | |
| 5 | K | B | -3.7516 | |
| 6 | G | B | -2.3634 | |
| 7 | G | B | -1.6502 | |
| 1 | G | C | -1.7404 | |
| 2 | G | C | -1.9161 | |
| 3 | G | C | -2.5733 | |
| 4 | H | C | -3.2101 | |
| 5 | K | C | -3.4997 | |
| 6 | G | C | -2.3777 | |
| 7 | G | C | -1.7840 | |
| 1 | G | D | -1.9423 | |
| 2 | G | D | -2.5389 | |
| 3 | G | D | -2.6960 | |
| 4 | H | D | -3.4512 | |
| 5 | K | D | -3.0844 | |
| 6 | G | D | -2.2682 | |
| 7 | G | D | -1.2307 | |
| 1 | G | E | -1.7748 | |
| 2 | G | E | -2.2250 | |
| 3 | G | E | -2.3996 | |
| 4 | H | E | -3.1036 | |
| 5 | K | E | -2.9775 | |
| 6 | G | E | -1.9277 | |
| 7 | G | E | -1.3218 | |
| 1 | G | F | -1.8203 | |
| 2 | G | F | -2.4559 | |
| 3 | G | F | -2.7769 | |
| 4 | H | F | -3.1736 | |
| 5 | K | F | -3.5404 | |
| 6 | G | F | -2.5935 | |
| 7 | G | F | -1.3092 | |
| 1 | G | G | -1.7108 | |
| 2 | G | G | -2.2477 | |
| 3 | G | G | -2.5000 | |
| 4 | H | G | -2.8909 | |
| 5 | K | G | -3.0859 | |
| 6 | G | G | -1.6426 | |
| 7 | G | G | -1.1877 | |
| 1 | G | H | -1.7866 | |
| 2 | G | H | -2.3497 | |
| 3 | G | H | -2.7380 | |
| 4 | H | H | -3.1178 | |
| 5 | K | H | -3.6931 | |
| 6 | G | H | -2.2427 | |
| 7 | G | H | -1.3271 | |
| 1 | G | I | -1.8667 | |
| 2 | G | I | -2.3680 | |
| 3 | G | I | -3.0564 | |
| 4 | H | I | -3.3976 | |
| 5 | K | I | -3.8869 | |
| 6 | G | I | -2.1419 | |
| 7 | G | I | -1.4432 | |
| 1 | G | J | 0.0000 | |
| 2 | G | J | -2.2419 | |
| 3 | G | J | -3.1658 | |
| 4 | H | J | -3.6428 | |
| 5 | K | J | -4.0430 | |
| 6 | G | J | -2.3019 | |
| 7 | G | J | -1.3523 | |
| 1 | G | K | -1.9141 | |
| 2 | G | K | -1.7028 | |
| 3 | G | K | 0.0000 | |
| 4 | H | K | -3.5661 | |
| 5 | K | K | -4.1917 | |
| 6 | G | K | -2.7609 | |
| 7 | G | K | -1.6171 | |
| 1 | G | L | -1.9009 | |
| 2 | G | L | -1.9698 | |
| 3 | G | L | -2.1320 | |
| 4 | H | L | -2.4565 | |
| 5 | K | L | -2.6605 | |
| 6 | G | L | -1.8490 | |
| 7 | G | L | -1.2542 | |
| 1 | G | M | -1.5594 | |
| 2 | G | M | -1.9857 | |
| 3 | G | M | -2.2574 | |
| 4 | H | M | -2.8548 | |
| 5 | K | M | -2.6858 | |
| 6 | G | M | -1.9289 | |
| 7 | G | M | -1.3039 | |
| 1 | G | N | -1.8121 | |
| 2 | G | N | -2.2464 | |
| 3 | G | N | -2.4368 | |
| 4 | H | N | -2.9525 | |
| 5 | K | N | -2.8789 | |
| 6 | G | N | -1.9214 | |
| 7 | G | N | -1.2928 | |
| 1 | G | O | -1.7651 | |
| 2 | G | O | -2.0538 | |
| 3 | G | O | -2.3331 | |
| 4 | H | O | -2.8077 | |
| 5 | K | O | -2.6819 | |
| 6 | G | O | -1.8787 | |
| 7 | G | O | -1.1579 | |
| 1 | G | P | -1.7473 | |
| 2 | G | P | -2.2394 | |
| 3 | G | P | -3.0823 | |
| 4 | H | P | -3.4207 | |
| 5 | K | P | -3.7346 | |
| 6 | G | P | -2.7001 | |
| 7 | G | P | -1.5195 | |
| 1 | G | Q | -2.1802 | |
| 2 | G | Q | -2.5591 | |
| 3 | G | Q | -3.0658 | |
| 4 | H | Q | -3.6055 | |
| 5 | K | Q | -3.5364 | |
| 6 | G | Q | -2.6556 | |
| 7 | G | Q | -1.6878 | |
| 1 | G | R | -1.7374 | |
| 2 | G | R | -1.8435 | |
| 3 | G | R | -2.4437 | |
| 4 | H | R | -2.8655 | |
| 5 | K | R | -3.2390 | |
| 6 | G | R | -2.3275 | |
| 7 | G | R | -1.5540 | |
| 1 | G | S | -1.9789 | |
| 2 | G | S | -2.2583 | |
| 3 | G | S | -2.7669 | |
| 4 | H | S | -3.1704 | |
| 5 | K | S | -3.0795 | |
| 6 | G | S | -2.3232 | |
| 7 | G | S | -1.4175 | |
| 1 | G | T | -1.8152 | |
| 2 | G | T | -1.9140 | |
| 3 | G | T | -2.6017 | |
| 4 | H | T | -3.0292 | |
| 5 | K | T | -3.1820 | |
| 6 | G | T | -2.6871 | |
| 7 | G | T | -1.4296 |