| Chain sequence(s) |
A: LPAPKNLWSRVTEDSARLSWTAPDAAFDSFWIRYFEFTTAGEAIVLTVPGSERSYDLTGLKPGTEYWNIMGVKGGSISPPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33)
[INFO] Main: Simulation completed successfully. (00:00:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.0280 | |
| 2 | P | A | 0.1413 | |
| 3 | A | A | -0.1646 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.7355 | |
| 6 | N | A | -1.4474 | |
| 7 | L | A | -0.3241 | |
| 8 | W | A | 0.1376 | |
| 9 | S | A | -0.5485 | |
| 10 | R | A | -1.9233 | |
| 11 | V | A | -1.3532 | |
| 12 | T | A | -1.6920 | |
| 13 | E | A | -2.8065 | |
| 14 | D | A | -2.8595 | |
| 15 | S | A | -2.2872 | |
| 16 | A | A | 0.0000 | |
| 17 | R | A | -1.9879 | |
| 18 | L | A | 0.0000 | |
| 19 | S | A | -0.8993 | |
| 20 | W | A | 0.0000 | |
| 21 | T | A | -1.2227 | |
| 22 | A | A | -1.3273 | |
| 23 | P | A | -1.3096 | |
| 24 | D | A | -2.2747 | |
| 25 | A | A | -1.4382 | |
| 26 | A | A | -1.0640 | |
| 27 | F | A | 0.0000 | |
| 28 | D | A | -2.6105 | |
| 29 | S | A | -1.1591 | |
| 30 | F | A | 0.0000 | |
| 31 | W | A | 0.6956 | |
| 32 | I | A | 0.0000 | |
| 33 | R | A | 0.0405 | |
| 34 | Y | A | 0.0000 | |
| 35 | F | A | 0.7445 | |
| 36 | E | A | 0.3102 | |
| 37 | F | A | 1.3922 | |
| 38 | T | A | 0.2469 | |
| 39 | T | A | -0.1579 | |
| 40 | A | A | -0.2443 | |
| 41 | G | A | -0.7662 | |
| 42 | E | A | -1.5015 | |
| 43 | A | A | -0.1810 | |
| 44 | I | A | 0.4953 | |
| 45 | V | A | 1.1983 | |
| 46 | L | A | 0.9164 | |
| 47 | T | A | 0.3426 | |
| 48 | V | A | 0.0000 | |
| 49 | P | A | -1.0990 | |
| 50 | G | A | 0.0000 | |
| 51 | S | A | -1.6305 | |
| 52 | E | A | -1.7399 | |
| 53 | R | A | -1.1404 | |
| 54 | S | A | -0.8640 | |
| 55 | Y | A | -1.0164 | |
| 56 | D | A | -2.0627 | |
| 57 | L | A | 0.0000 | |
| 58 | T | A | -1.4890 | |
| 59 | G | A | -1.5397 | |
| 60 | L | A | 0.0000 | |
| 61 | K | A | -2.2029 | |
| 62 | P | A | -1.7355 | |
| 63 | G | A | -0.6438 | |
| 64 | T | A | 0.7482 | |
| 65 | E | A | 0.0000 | |
| 66 | Y | A | 1.7665 | |
| 67 | W | A | 0.0000 | |
| 68 | N | A | 0.1980 | |
| 69 | I | A | 0.0000 | |
| 70 | M | A | 0.0000 | |
| 71 | G | A | 0.0000 | |
| 72 | V | A | -0.3124 | |
| 73 | K | A | -1.3338 | |
| 74 | G | A | -1.2912 | |
| 75 | G | A | -0.8764 | |
| 76 | S | A | -0.0839 | |
| 77 | I | A | 1.1902 | |
| 78 | S | A | 0.0000 | |
| 79 | P | A | 0.1316 | |
| 80 | P | A | -0.3348 | |
| 81 | L | A | -0.5391 | |
| 82 | S | A | 0.1573 | |
| 83 | A | A | 1.3565 | |
| 84 | I | A | 2.3296 | |
| 85 | F | A | 1.2053 | |
| 86 | T | A | 0.0254 | |
| 87 | T | A | -1.5693 |