Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGFFITNNYWGWVRQAPGKGLEWVGYISYSGSTSYNPSLKSRFTISRDTSKNTFYLQMNSLRAEDTAVYYCARTGSSGYFDFWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASESVDDLLHWYQQKPGKAPKLLIKYASQSISGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNSLPNTFGQGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:27) [INFO] Main: Simulation completed successfully. (00:01:28) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | E | H | -1.9414 | |
2 | V | H | -0.8075 | |
3 | Q | H | -0.9911 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.6703 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.2662 | |
8 | G | H | -0.5737 | |
9 | G | H | 0.1138 | |
11 | G | H | 0.8088 | |
12 | L | H | 1.3646 | |
13 | V | H | -0.0516 | |
14 | Q | H | -1.3552 | |
15 | P | H | -1.4827 | |
16 | G | H | -1.4706 | |
17 | G | H | -1.1849 | |
18 | S | H | -1.0029 | |
19 | L | H | -0.7650 | |
20 | R | H | -1.5909 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.3409 | |
23 | C | H | 0.0000 | |
24 | A | H | -0.1297 | |
25 | A | H | -0.0222 | |
26 | S | H | -0.3823 | |
27 | G | H | -0.6821 | |
28 | F | H | 0.3452 | |
29 | F | H | 1.4107 | |
30 | I | H | 0.0000 | |
35 | T | H | 0.3120 | |
36 | N | H | -0.2387 | |
37 | N | H | 0.1647 | |
38 | Y | H | 0.3534 | |
39 | W | H | 0.0000 | |
40 | G | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | -0.3872 | |
44 | Q | H | -0.7196 | |
45 | A | H | -1.1175 | |
46 | P | H | -1.0608 | |
47 | G | H | -1.4512 | |
48 | K | H | -2.3719 | |
49 | G | H | -1.6355 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.9517 | |
52 | W | H | 0.0000 | |
53 | V | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | Y | H | 0.3306 | |
56 | I | H | 0.0000 | |
57 | S | H | 0.0000 | |
58 | Y | H | 0.9728 | |
59 | S | H | 0.0815 | |
63 | G | H | -0.0099 | |
64 | S | H | -0.0795 | |
65 | T | H | 0.0408 | |
66 | S | H | -0.1248 | |
67 | Y | H | -0.3987 | |
68 | N | H | -0.8375 | |
69 | P | H | -1.1407 | |
70 | S | H | -0.9000 | |
71 | L | H | 0.0000 | |
72 | K | H | -1.9883 | |
74 | S | H | -1.2741 | |
75 | R | H | -1.1248 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.7192 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.4132 | |
80 | R | H | -0.9056 | |
81 | D | H | -1.2486 | |
82 | T | H | -0.7918 | |
83 | S | H | -1.1050 | |
84 | K | H | -1.9164 | |
85 | N | H | -0.8681 | |
86 | T | H | -0.5742 | |
87 | F | H | 0.0000 | |
88 | Y | H | -0.4835 | |
89 | L | H | 0.0000 | |
90 | Q | H | -1.0229 | |
91 | M | H | 0.0000 | |
92 | N | H | -1.2394 | |
93 | S | H | -1.2393 | |
94 | L | H | 0.0000 | |
95 | R | H | -2.3216 | |
96 | A | H | -1.7068 | |
97 | E | H | -2.2345 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.4150 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.5222 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | -0.0669 | |
107 | T | H | 0.0000 | |
108 | G | H | -0.1527 | |
109 | S | H | -0.1428 | |
110 | S | H | -0.3596 | |
113 | G | H | -0.1240 | |
114 | Y | H | 0.0116 | |
115 | F | H | 0.0000 | |
116 | D | H | -0.1552 | |
117 | F | H | 0.3447 | |
118 | W | H | -0.1660 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.3257 | |
121 | G | H | -0.3985 | |
122 | T | H | 0.4529 | |
123 | L | H | 1.5885 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.3206 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.5538 | |
128 | S | H | -0.5484 | |
1 | D | L | -2.1420 | |
2 | I | L | 0.0000 | |
3 | Q | L | -2.3371 | |
4 | M | L | 0.0000 | |
5 | T | L | -1.4478 | |
6 | Q | L | 0.0000 | |
7 | S | L | -0.7475 | |
8 | P | L | -0.5402 | |
9 | S | L | -0.8907 | |
10 | S | L | -0.9908 | |
11 | L | L | -0.7405 | |
12 | S | L | -0.9555 | |
13 | A | L | -0.9604 | |
14 | S | L | -0.8793 | |
15 | V | L | -0.1459 | |
16 | G | L | -0.7843 | |
17 | D | L | -1.8973 | |
18 | R | L | -2.4164 | |
19 | V | L | 0.0000 | |
20 | T | L | -0.6502 | |
21 | I | L | 0.0000 | |
22 | T | L | -0.8009 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.7453 | |
25 | A | L | 0.0000 | |
26 | S | L | -2.0409 | |
27 | E | L | -2.4106 | |
28 | S | L | -1.9138 | |
29 | V | L | 0.0000 | |
36 | D | L | -2.4489 | |
37 | D | L | -2.1680 | |
38 | L | L | -1.0284 | |
39 | L | L | 0.0000 | |
40 | H | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | -0.8602 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.7043 | |
46 | P | L | -1.1661 | |
47 | G | L | -1.6770 | |
48 | K | L | -2.6186 | |
49 | A | L | -1.5513 | |
50 | P | L | 0.0000 | |
51 | K | L | -1.3412 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | K | L | -0.5860 | |
56 | Y | L | -0.7709 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.9168 | |
66 | Q | L | -1.1675 | |
67 | S | L | -0.6583 | |
68 | I | L | -0.4049 | |
69 | S | L | -0.3938 | |
70 | G | L | -0.4659 | |
71 | V | L | -0.3237 | |
72 | P | L | -0.3581 | |
74 | S | L | -0.4957 | |
75 | R | L | -0.7911 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.5740 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.8101 | |
80 | G | L | -1.3433 | |
83 | S | L | -1.7192 | |
84 | G | L | -1.9391 | |
85 | T | L | -2.0917 | |
86 | D | L | -2.2919 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.6845 | |
89 | L | L | 0.0000 | |
90 | T | L | 0.0000 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.4279 | |
93 | S | L | -1.2705 | |
94 | L | L | 0.0000 | |
95 | Q | L | -0.9114 | |
96 | P | L | -0.9745 | |
97 | E | L | -1.6008 | |
98 | D | L | 0.0000 | |
99 | F | L | -0.3896 | |
100 | A | L | 0.0000 | |
101 | T | L | -0.9328 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | G | L | -0.4668 | |
108 | N | L | -0.9478 | |
109 | S | L | -0.2544 | |
114 | L | L | 0.3182 | |
115 | P | L | 0.0000 | |
116 | N | L | 0.0000 | |
117 | T | L | -0.7521 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | Q | L | -1.8108 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.6599 | |
124 | V | L | 0.0000 | |
125 | E | L | -1.0988 | |
126 | I | L | -0.6839 | |
127 | K | L | -1.5619 |