Project name: Halo7

Status: done

Started: 2026-05-29 02:59:43
Settings
Chain sequence(s) A: GIGTGFPFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYVWRNIIPHVAPTHRCIAPDLIGMGKSDKPDLGYFFDDHVRFMDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIAFMEFIIRPIPTWDDEWPEFARETFQAFRTTDVGRKLIIIDQNVFIEGTLPMMGVVRPLTEVEMDHYREPFLNPVDREPLWRFPNELPIAGEEPANIVALVEEYMDDWLLHQQSPVPKLLFWGTPGVLIPPAEAARLAKSLPNNCKAVDIGPGLNLLQEDNPDLIGSEIARWLSTLEI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:45)
Show buried residues

Minimal score value
-3.1809
Maximal score value
0.9188
Average score
-0.6907
Total score value
-202.3842

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
3 G A -0.1826
4 I A -0.0440
5 G A -0.1294
6 T A -0.1493
7 G A -0.1553
8 F A -0.1680
9 P A -0.4993
10 F A -0.7429
11 D A -1.8009
12 P A -1.3158
13 H A -0.8893
14 Y A -0.8334
15 V A -0.9288
16 E A -2.3060
17 V A 0.0000
18 L A -0.2211
19 G A -1.0729
20 E A -1.9318
21 R A -2.8672
22 M A 0.0000
23 H A 0.0000
24 Y A -0.5330
25 V A 0.0000
26 D A -0.6294
27 V A -0.5010
28 G A -1.0760
29 P A -1.8667
30 R A -2.9978
31 D A -3.0601
32 G A -1.7976
33 T A 0.0000
34 P A 0.0000
35 V A 0.0000
36 L A 0.0000
37 F A 0.0000
38 L A 0.0000
39 H A 0.0000
40 G A 0.0000
41 N A 0.0000
42 P A 0.0000
43 T A 0.0000
44 S A -0.3394
45 S A 0.0000
46 Y A 0.0000
47 V A 0.0000
48 W A 0.0000
49 R A 0.0000
50 N A -0.6487
51 I A 0.0000
52 I A 0.0000
53 P A -0.6786
54 H A -0.9718
55 V A 0.0000
56 A A -0.4216
57 P A -0.4871
58 T A -0.8930
59 H A -1.1449
60 R A -1.3536
61 C A 0.0000
62 I A 0.0000
63 A A 0.0000
64 P A 0.0000
65 D A 0.0000
66 L A 0.0000
67 I A 0.0000
68 G A 0.0000
69 M A 0.0000
70 G A -1.5505
71 K A -2.4916
72 S A 0.0000
73 D A -2.7325
74 K A -2.1347
75 P A -1.8314
76 D A -1.8960
77 L A -0.6734
78 G A -0.4337
79 Y A 0.0000
80 F A 0.4417
81 F A 0.0000
82 D A -1.8959
83 D A -1.2434
84 H A 0.0000
85 V A -1.4127
86 R A -2.2835
87 F A 0.0000
88 M A 0.0000
89 D A -1.3978
90 A A -1.2472
91 F A 0.0000
92 I A 0.0000
93 E A -2.0972
94 A A -1.0262
95 L A -0.9002
96 G A -1.4726
97 L A 0.0000
98 E A -2.7718
99 E A -2.1420
100 V A 0.0000
101 V A 0.0000
102 L A 0.0000
103 V A 0.0000
104 I A 0.0000
105 H A 0.0000
106 D A 0.0000
107 W A 0.0000
108 G A 0.0000
109 S A 0.0000
110 A A 0.0000
111 L A 0.0000
112 G A 0.0000
113 F A 0.0000
114 H A -0.7842
115 W A 0.0000
116 A A 0.0000
117 K A -1.8854
118 R A -1.6877
119 N A -1.6872
120 P A -1.8403
121 E A -2.7007
122 R A -2.3189
123 V A 0.0000
124 K A -1.1198
125 G A 0.0000
126 I A 0.0000
127 A A 0.0000
128 F A 0.0000
129 M A 0.0000
130 E A 0.0000
131 F A 0.0000
132 I A 0.0000
133 R A 0.0000
134 P A -0.7891
135 I A 0.0000
136 P A -1.0360
137 T A -1.2387
138 W A -1.7724
139 D A -2.6432
140 E A -2.1893
141 W A 0.0000
142 P A -1.1619
143 E A -1.8030
144 F A 0.6890
145 A A 0.0000
146 R A -1.8835
147 E A -2.2035
148 T A -1.0402
149 F A 0.0000
150 Q A -1.3809
151 A A -1.1432
152 F A 0.0000
153 R A -0.7131
154 T A -0.9017
155 T A -1.2044
156 D A -1.9224
157 V A -0.8823
158 G A 0.0000
159 R A -2.0239
160 K A -2.5375
161 L A -1.3658
162 I A 0.0000
163 I A -1.3319
164 D A -2.6041
165 Q A -2.4677
166 N A 0.0000
167 V A -0.9875
168 F A 0.0000
169 I A 0.0000
170 E A -1.4482
171 G A -0.7742
172 T A -0.2824
173 L A 0.0000
174 P A -0.1115
175 M A 0.4919
176 G A 0.0000
177 V A 0.0000
178 V A 0.9188
179 R A 0.1163
180 P A -0.2355
181 L A -0.0197
182 T A -0.6828
183 E A -1.6991
184 V A -0.4034
185 E A 0.0000
186 M A 0.0000
187 D A -2.3711
188 H A -1.8590
189 Y A 0.0000
190 R A -1.8761
191 E A -2.5789
192 P A -1.7291
193 F A 0.0000
194 L A 0.2784
195 N A -0.5592
196 P A -0.2907
197 V A 0.7602
198 D A -0.1539
199 R A 0.0000
200 E A -0.3044
201 P A 0.0000
202 L A 0.0000
203 W A 0.0000
204 R A -0.1846
205 F A 0.0000
206 P A 0.0000
207 N A -0.4920
208 E A 0.0000
209 L A 0.0000
210 P A 0.0000
211 I A 0.0000
212 A A -1.1268
213 G A -1.4683
214 E A -2.2522
215 P A -1.5749
216 A A -1.2682
217 N A -1.6388
218 I A 0.0000
219 V A -1.3299
220 A A -1.4131
221 L A -1.2764
222 V A 0.0000
223 E A -2.9145
224 E A -3.0887
225 Y A 0.0000
226 M A 0.0000
227 D A -3.1809
228 W A -2.1993
229 L A 0.0000
230 H A -1.5796
231 Q A -1.9148
232 S A -1.3095
233 P A -0.9967
234 V A 0.0000
235 P A -0.9573
236 K A 0.0000
237 L A 0.0000
238 L A 0.0000
239 F A 0.0000
240 W A -0.4995
241 G A 0.0000
242 T A -0.3792
243 P A -0.1383
244 G A 0.0000
245 V A 0.1012
246 L A 0.0000
247 I A 0.0000
248 P A -0.3398
249 P A -0.6131
250 A A -0.5367
251 E A -0.8627
252 A A 0.0000
253 A A -1.3509
254 R A -1.8558
255 L A 0.0000
256 A A -1.7158
257 K A -2.4288
258 S A -1.6128
259 L A 0.0000
260 P A -1.5762
261 N A -1.9835
262 C A -1.4606
263 K A -1.5328
264 A A -1.0269
265 V A 0.0000
266 D A -1.6233
267 I A 0.0000
268 G A -0.8118
269 P A -0.4285
270 G A 0.0000
271 L A 0.3429
272 N A 0.1865
273 L A 0.0000
274 L A 0.0000
275 Q A 0.0000
276 E A 0.0000
277 D A -0.3377
278 N A -1.0517
279 P A 0.0000
280 D A -1.8117
281 L A -0.9421
282 I A 0.0000
283 G A 0.0000
284 S A -0.9943
285 E A -0.8752
286 I A 0.0000
287 A A -0.7782
288 R A -1.2254
289 W A 0.0000
290 L A 0.0000
291 S A -0.7327
292 T A -0.5991
293 L A -0.7453
294 E A -1.4547
295 I A -0.3163
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Laboratory of Theory of Biopolymers 2018