| Chain sequence(s) |
A: EACNLPIVRGPCIAFFPRWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYCGVP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:03)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:19)
[INFO] Main: Simulation completed successfully. (00:01:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9485 | |
| 2 | A | A | -1.0166 | |
| 3 | C | A | -1.0307 | |
| 4 | N | A | -1.2554 | |
| 5 | L | A | -0.4847 | |
| 6 | P | A | 0.0521 | |
| 7 | I | A | 0.4260 | |
| 8 | V | A | -0.4787 | |
| 9 | R | A | -1.1621 | |
| 10 | G | A | -0.9275 | |
| 11 | P | A | -0.2089 | |
| 12 | C | A | 0.9612 | |
| 13 | I | A | 2.5554 | |
| 14 | A | A | 2.1804 | |
| 15 | F | A | 2.8415 | |
| 16 | F | A | 2.5372 | |
| 17 | P | A | 1.2208 | |
| 18 | R | A | 0.8168 | |
| 19 | W | A | 0.3865 | |
| 20 | A | A | 0.0000 | |
| 21 | F | A | -0.2590 | |
| 22 | D | A | -0.3279 | |
| 23 | A | A | -0.2049 | |
| 24 | V | A | 0.4324 | |
| 25 | K | A | -1.4070 | |
| 26 | G | A | -1.2541 | |
| 27 | K | A | -2.0034 | |
| 28 | C | A | -1.2327 | |
| 29 | V | A | 0.3418 | |
| 30 | L | A | 1.6706 | |
| 31 | F | A | 0.0000 | |
| 32 | P | A | 1.0811 | |
| 33 | Y | A | 0.7587 | |
| 34 | G | A | 0.0000 | |
| 35 | G | A | 0.6572 | |
| 36 | C | A | -0.1452 | |
| 37 | Q | A | -1.5843 | |
| 38 | G | A | -1.4026 | |
| 39 | N | A | -0.9510 | |
| 40 | G | A | -1.1250 | |
| 41 | N | A | 0.0000 | |
| 42 | K | A | -0.3476 | |
| 43 | F | A | 0.0000 | |
| 44 | Y | A | 0.9186 | |
| 45 | S | A | -0.7039 | |
| 46 | E | A | -1.7552 | |
| 47 | K | A | -2.7860 | |
| 48 | E | A | -1.9831 | |
| 49 | C | A | 0.0000 | |
| 50 | R | A | -2.8366 | |
| 51 | E | A | -2.6038 | |
| 52 | Y | A | -0.6300 | |
| 53 | C | A | -1.2468 | |
| 54 | G | A | -1.1283 | |
| 55 | V | A | -1.3111 | |
| 56 | P | A | -1.1966 |