| Chain sequence(s) |
A: SAIACGESCVYIPCFIPGCSCRNRVCYLN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 0.2778 | |
| 2 | A | A | 0.5953 | |
| 3 | I | A | 2.0276 | |
| 4 | A | A | 0.9617 | |
| 5 | C | A | 0.9290 | |
| 6 | G | A | 0.0814 | |
| 7 | E | A | 0.3884 | |
| 8 | S | A | 0.4599 | |
| 9 | C | A | 0.9385 | |
| 10 | V | A | 1.8898 | |
| 11 | Y | A | 2.2849 | |
| 12 | I | A | 1.8940 | |
| 13 | P | A | 1.3549 | |
| 14 | C | A | 1.6129 | |
| 15 | F | A | 2.3249 | |
| 16 | I | A | 1.6408 | |
| 17 | P | A | 0.5755 | |
| 18 | G | A | -0.1909 | |
| 19 | C | A | 0.0000 | |
| 20 | S | A | -0.3452 | |
| 21 | C | A | -0.5741 | |
| 22 | R | A | -2.0628 | |
| 23 | N | A | -2.2761 | |
| 24 | R | A | -1.4368 | |
| 25 | V | A | -0.6682 | |
| 26 | C | A | 0.0000 | |
| 27 | Y | A | 0.3200 | |
| 28 | L | A | 0.7151 | |
| 29 | N | A | -0.6176 |