Project name: query_structure

Status: done

Started: 2026-03-17 01:00:28
Settings
Chain sequence(s) A: SAIACGESCVYIPCFIPGCSCRNRVCYLN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:10)
Show buried residues

Minimal score value
-2.2761
Maximal score value
2.3249
Average score
0.4517
Total score value
13.1007

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A 0.2778
2 A A 0.5953
3 I A 2.0276
4 A A 0.9617
5 C A 0.9290
6 G A 0.0814
7 E A 0.3884
8 S A 0.4599
9 C A 0.9385
10 V A 1.8898
11 Y A 2.2849
12 I A 1.8940
13 P A 1.3549
14 C A 1.6129
15 F A 2.3249
16 I A 1.6408
17 P A 0.5755
18 G A -0.1909
19 C A 0.0000
20 S A -0.3452
21 C A -0.5741
22 R A -2.0628
23 N A -2.2761
24 R A -1.4368
25 V A -0.6682
26 C A 0.0000
27 Y A 0.3200
28 L A 0.7151
29 N A -0.6176
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Laboratory of Theory of Biopolymers 2018