Project name: jehad fakhouri [mutate: KN60A]

Status: done

Started: 2026-03-17 06:31:57
Settings
Chain sequence(s) A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDMPQLNPAPWLSILVFSWLVFLIILPPKVMAHTYPNEPTPQSTEKPKGEPWNWPWH
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues KN60A
Energy difference between WT (input) and mutated protein (by FoldX) 1.02869 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:03:54)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:04:03)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:27)
Show buried residues

Minimal score value
-2.3339
Maximal score value
2.3952
Average score
-0.1072
Total score value
-16.3949

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.7267
2 D A -1.2730
3 V A 1.7999
4 F A 2.3952
5 M A 0.8272
6 K A -1.6390
7 G A -0.5763
8 L A 0.6335
9 S A -0.2510
10 K A -1.7003
11 A A -0.5522
12 K A -1.9521
13 E A -2.1809
14 G A -0.3562
15 V A 2.0324
16 V A 2.1031
17 A A 0.3212
18 A A 0.0478
19 A A -0.1299
20 E A -2.1265
21 K A -2.1661
22 T A -0.6891
23 K A -1.9314
24 Q A -1.7545
25 G A -0.3044
26 V A 1.7091
27 A A 0.0343
28 E A -1.8069
29 A A -0.2867
30 A A -0.0214
31 G A -0.9396
32 K A -1.7947
33 T A -0.7427
34 K A -1.9862
35 E A -1.5217
36 G A -0.3766
37 V A 1.8762
38 L A 1.4659
39 Y A 1.5758
40 V A 0.6110
41 G A -0.0595
42 S A -0.3575
43 K A -1.7090
44 T A -0.6702
45 K A -2.0363
46 E A -2.1798
47 G A -0.3484
48 V A 1.5940
49 V A 1.5267
50 H A -0.2436
51 G A 0.1996
52 V A 1.7460
53 A A 0.3091
54 T A 0.2822
55 V A 1.7718
56 A A 0.0350
57 E A -2.1222
58 K A -2.0413
59 T A -0.4287
60 N A -0.5352 mutated: KN60A
61 E A -1.1153
62 Q A -1.2685
63 V A 0.0958
64 T A -0.2063
65 N A -1.1642
66 V A 0.3848
67 G A 0.0000
68 G A -0.3541
69 A A 0.1435
70 V A 0.6315
71 V A 0.6705
72 T A -0.0098
73 G A -0.1338
74 V A 0.3504
75 T A 0.0481
76 A A 0.3445
77 V A 1.5772
78 A A 0.1092
79 Q A -1.5073
80 K A -1.7213
81 T A -0.3807
82 V A 0.0000
83 E A -1.8737
84 G A -0.6237
85 A A -0.1201
86 G A -0.5018
87 S A 0.0696
88 I A 1.9810
89 A A 0.4181
90 A A 0.0246
91 A A 0.0562
92 T A -0.1454
93 G A -0.1177
94 F A 2.1324
95 V A 1.5615
96 K A -1.7340
97 K A -2.3339
98 D A -2.0976
1 M A 1.0084
2 P A -0.2853
3 Q A -0.9634
4 L A 1.2173
5 N A -0.3837
6 P A -0.3539
7 A A 0.0033
8 P A 0.1705
9 W A 1.6621
10 L A 1.7238
11 S A 0.4303
12 I A 2.1357
13 L A 0.8857
14 V A 2.0399
15 F A 2.2271
16 S A 0.4934
17 W A 1.4135
18 L A 1.2040
19 V A 0.4947
20 F A 1.0953
21 L A 2.0241
22 I A 2.3864
23 I A 1.0535
24 L A 0.0000
25 P A -0.1177
26 P A -0.5764
27 K A -1.6845
28 V A 0.2255
29 M A 1.1259
30 A A 0.1698
31 H A -0.4392
32 T A -0.1164
33 Y A 0.1251
34 P A -0.2829
35 N A -0.7162
36 E A -1.8970
37 P A -0.4315
38 T A -0.1329
39 P A -0.3723
40 Q A -0.6492
41 S A -0.3288
42 T A -0.4537
43 E A -2.1471
44 K A -2.0819
45 P A -0.8727
46 K A -1.8329
47 G A -1.0707
48 E A -1.6896
49 P A -0.3185
50 W A 0.9056
51 N A -0.8392
52 W A 0.9257
53 P A 0.2709
54 W A 0.9741
55 H A -0.7712
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018