| Chain sequence(s) |
A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDMPQLNPAPWLSILVFSWLVFLIILPPKVMAHTYPNEPTPQSTEKPKGEPWNWPWH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | KN60A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 1.02869 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:03:54)
[INFO] FoldX: Starting FoldX energy minimalization (00:04:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:26)
[INFO] Main: Simulation completed successfully. (00:05:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7267 | |
| 2 | D | A | -1.2730 | |
| 3 | V | A | 1.7999 | |
| 4 | F | A | 2.3952 | |
| 5 | M | A | 0.8272 | |
| 6 | K | A | -1.6390 | |
| 7 | G | A | -0.5763 | |
| 8 | L | A | 0.6335 | |
| 9 | S | A | -0.2510 | |
| 10 | K | A | -1.7003 | |
| 11 | A | A | -0.5522 | |
| 12 | K | A | -1.9521 | |
| 13 | E | A | -2.1809 | |
| 14 | G | A | -0.3562 | |
| 15 | V | A | 2.0324 | |
| 16 | V | A | 2.1031 | |
| 17 | A | A | 0.3212 | |
| 18 | A | A | 0.0478 | |
| 19 | A | A | -0.1299 | |
| 20 | E | A | -2.1265 | |
| 21 | K | A | -2.1661 | |
| 22 | T | A | -0.6891 | |
| 23 | K | A | -1.9314 | |
| 24 | Q | A | -1.7545 | |
| 25 | G | A | -0.3044 | |
| 26 | V | A | 1.7091 | |
| 27 | A | A | 0.0343 | |
| 28 | E | A | -1.8069 | |
| 29 | A | A | -0.2867 | |
| 30 | A | A | -0.0214 | |
| 31 | G | A | -0.9396 | |
| 32 | K | A | -1.7947 | |
| 33 | T | A | -0.7427 | |
| 34 | K | A | -1.9862 | |
| 35 | E | A | -1.5217 | |
| 36 | G | A | -0.3766 | |
| 37 | V | A | 1.8762 | |
| 38 | L | A | 1.4659 | |
| 39 | Y | A | 1.5758 | |
| 40 | V | A | 0.6110 | |
| 41 | G | A | -0.0595 | |
| 42 | S | A | -0.3575 | |
| 43 | K | A | -1.7090 | |
| 44 | T | A | -0.6702 | |
| 45 | K | A | -2.0363 | |
| 46 | E | A | -2.1798 | |
| 47 | G | A | -0.3484 | |
| 48 | V | A | 1.5940 | |
| 49 | V | A | 1.5267 | |
| 50 | H | A | -0.2436 | |
| 51 | G | A | 0.1996 | |
| 52 | V | A | 1.7460 | |
| 53 | A | A | 0.3091 | |
| 54 | T | A | 0.2822 | |
| 55 | V | A | 1.7718 | |
| 56 | A | A | 0.0350 | |
| 57 | E | A | -2.1222 | |
| 58 | K | A | -2.0413 | |
| 59 | T | A | -0.4287 | |
| 60 | N | A | -0.5352 | mutated: KN60A |
| 61 | E | A | -1.1153 | |
| 62 | Q | A | -1.2685 | |
| 63 | V | A | 0.0958 | |
| 64 | T | A | -0.2063 | |
| 65 | N | A | -1.1642 | |
| 66 | V | A | 0.3848 | |
| 67 | G | A | 0.0000 | |
| 68 | G | A | -0.3541 | |
| 69 | A | A | 0.1435 | |
| 70 | V | A | 0.6315 | |
| 71 | V | A | 0.6705 | |
| 72 | T | A | -0.0098 | |
| 73 | G | A | -0.1338 | |
| 74 | V | A | 0.3504 | |
| 75 | T | A | 0.0481 | |
| 76 | A | A | 0.3445 | |
| 77 | V | A | 1.5772 | |
| 78 | A | A | 0.1092 | |
| 79 | Q | A | -1.5073 | |
| 80 | K | A | -1.7213 | |
| 81 | T | A | -0.3807 | |
| 82 | V | A | 0.0000 | |
| 83 | E | A | -1.8737 | |
| 84 | G | A | -0.6237 | |
| 85 | A | A | -0.1201 | |
| 86 | G | A | -0.5018 | |
| 87 | S | A | 0.0696 | |
| 88 | I | A | 1.9810 | |
| 89 | A | A | 0.4181 | |
| 90 | A | A | 0.0246 | |
| 91 | A | A | 0.0562 | |
| 92 | T | A | -0.1454 | |
| 93 | G | A | -0.1177 | |
| 94 | F | A | 2.1324 | |
| 95 | V | A | 1.5615 | |
| 96 | K | A | -1.7340 | |
| 97 | K | A | -2.3339 | |
| 98 | D | A | -2.0976 | |
| 1 | M | A | 1.0084 | |
| 2 | P | A | -0.2853 | |
| 3 | Q | A | -0.9634 | |
| 4 | L | A | 1.2173 | |
| 5 | N | A | -0.3837 | |
| 6 | P | A | -0.3539 | |
| 7 | A | A | 0.0033 | |
| 8 | P | A | 0.1705 | |
| 9 | W | A | 1.6621 | |
| 10 | L | A | 1.7238 | |
| 11 | S | A | 0.4303 | |
| 12 | I | A | 2.1357 | |
| 13 | L | A | 0.8857 | |
| 14 | V | A | 2.0399 | |
| 15 | F | A | 2.2271 | |
| 16 | S | A | 0.4934 | |
| 17 | W | A | 1.4135 | |
| 18 | L | A | 1.2040 | |
| 19 | V | A | 0.4947 | |
| 20 | F | A | 1.0953 | |
| 21 | L | A | 2.0241 | |
| 22 | I | A | 2.3864 | |
| 23 | I | A | 1.0535 | |
| 24 | L | A | 0.0000 | |
| 25 | P | A | -0.1177 | |
| 26 | P | A | -0.5764 | |
| 27 | K | A | -1.6845 | |
| 28 | V | A | 0.2255 | |
| 29 | M | A | 1.1259 | |
| 30 | A | A | 0.1698 | |
| 31 | H | A | -0.4392 | |
| 32 | T | A | -0.1164 | |
| 33 | Y | A | 0.1251 | |
| 34 | P | A | -0.2829 | |
| 35 | N | A | -0.7162 | |
| 36 | E | A | -1.8970 | |
| 37 | P | A | -0.4315 | |
| 38 | T | A | -0.1329 | |
| 39 | P | A | -0.3723 | |
| 40 | Q | A | -0.6492 | |
| 41 | S | A | -0.3288 | |
| 42 | T | A | -0.4537 | |
| 43 | E | A | -2.1471 | |
| 44 | K | A | -2.0819 | |
| 45 | P | A | -0.8727 | |
| 46 | K | A | -1.8329 | |
| 47 | G | A | -1.0707 | |
| 48 | E | A | -1.6896 | |
| 49 | P | A | -0.3185 | |
| 50 | W | A | 0.9056 | |
| 51 | N | A | -0.8392 | |
| 52 | W | A | 0.9257 | |
| 53 | P | A | 0.2709 | |
| 54 | W | A | 0.9741 | |
| 55 | H | A | -0.7712 |