| Chain sequence(s) |
H: QVQLQESGPGLVKPSETLSLTCTVSGFSLIGYDLNWIRQPPGKGLEWIGIIWGDGTTDYNSAVKSRVTISKDTSKNQFSLKLSSVTAADTAVYYCARGGYWYATSYYFDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQSISNNLNWYQQKPGKAPKLLIYYTSRFHSGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQEHTLPYTFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12)
[INFO] Main: Simulation completed successfully. (00:01:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.5499 | |
| 2 | V | H | -0.9563 | |
| 3 | Q | H | -1.7090 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.5740 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.7302 | |
| 8 | G | H | -0.5038 | |
| 9 | P | H | -0.1851 | |
| 11 | G | H | 0.1052 | |
| 12 | L | H | 0.4579 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.5290 | |
| 15 | P | H | -1.1654 | |
| 16 | S | H | -1.1879 | |
| 17 | E | H | -1.5828 | |
| 18 | T | H | -1.2428 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.9067 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.6839 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.1743 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.1491 | |
| 27 | G | H | -1.1634 | |
| 28 | F | H | -0.2530 | |
| 29 | S | H | 0.2792 | |
| 30 | L | H | 0.0000 | |
| 35 | I | H | 1.3796 | |
| 36 | G | H | 0.5590 | |
| 37 | Y | H | 0.6692 | |
| 38 | D | H | 0.2204 | |
| 39 | L | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6909 | |
| 45 | P | H | -0.7803 | |
| 46 | P | H | -0.8851 | |
| 47 | G | H | -1.4512 | |
| 48 | K | H | -2.3166 | |
| 49 | G | H | -1.5173 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9044 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | I | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | W | H | -0.3825 | |
| 58 | G | H | -0.2541 | |
| 59 | D | H | -1.4870 | |
| 63 | G | H | -1.0946 | |
| 64 | T | H | -0.8185 | |
| 65 | T | H | -0.5534 | |
| 66 | D | H | -0.4783 | |
| 67 | Y | H | -0.5053 | |
| 68 | N | H | 0.0000 | |
| 69 | S | H | -0.8931 | |
| 70 | A | H | -0.7100 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -1.6378 | |
| 74 | S | H | -1.0889 | |
| 75 | R | H | -1.2060 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.9552 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.7977 | |
| 80 | K | H | -1.2085 | |
| 81 | D | H | -1.7036 | |
| 82 | T | H | -0.9984 | |
| 83 | S | H | -1.4655 | |
| 84 | K | H | -2.3158 | |
| 85 | N | H | -1.4523 | |
| 86 | Q | H | -1.5538 | |
| 87 | F | H | 0.0000 | |
| 88 | S | H | -0.7778 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.5240 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.0397 | |
| 93 | S | H | -0.9716 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | -0.5099 | |
| 96 | A | H | -0.1908 | |
| 97 | A | H | 0.0620 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.2157 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.4108 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | G | H | 0.0000 | |
| 109 | Y | H | 1.8719 | |
| 110 | W | H | 1.7877 | |
| 111 | Y | H | 1.9417 | |
| 111A | A | H | 1.0756 | |
| 112A | T | H | 0.6761 | |
| 112 | S | H | 0.0000 | |
| 113 | Y | H | 0.9623 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.3052 | |
| 118 | W | H | -0.3799 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.8560 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.1277 | |
| 123 | L | H | 0.6878 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2109 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4669 | |
| 128 | S | H | -0.6019 | |
| 1 | D | L | -2.1331 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2346 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3947 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6983 | |
| 8 | P | L | -0.5877 | |
| 9 | S | L | -0.9615 | |
| 10 | S | L | -1.3023 | |
| 11 | L | L | -1.0052 | |
| 12 | S | L | -1.4097 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.9016 | |
| 15 | V | L | 0.1724 | |
| 16 | G | L | -0.7394 | |
| 17 | D | L | -1.9268 | |
| 18 | R | L | -2.3514 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6663 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8007 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.7246 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.8984 | |
| 27 | Q | L | -1.9025 | |
| 28 | S | L | -1.2928 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.7692 | |
| 37 | N | L | -0.7847 | |
| 38 | N | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.3770 | |
| 45 | K | L | -1.7669 | |
| 46 | P | L | -1.1601 | |
| 47 | G | L | -1.7057 | |
| 48 | K | L | -2.6339 | |
| 49 | A | L | -1.5960 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.3217 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0000 | |
| 56 | Y | L | -0.0347 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | -0.3560 | |
| 66 | R | L | -0.1997 | |
| 67 | F | L | 0.4448 | |
| 68 | H | L | -0.1330 | |
| 69 | S | L | -0.3011 | |
| 70 | G | L | -0.4219 | |
| 71 | V | L | -0.2432 | |
| 72 | P | L | -0.2718 | |
| 74 | S | L | -0.3065 | |
| 75 | R | L | -0.7711 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.2793 | |
| 78 | G | L | -0.2744 | |
| 79 | S | L | -0.6869 | |
| 80 | G | L | -1.0648 | |
| 83 | S | L | -1.0811 | |
| 84 | G | L | -1.1844 | |
| 85 | T | L | -1.6803 | |
| 86 | D | L | -2.0800 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7184 | |
| 89 | F | L | 0.0000 | |
| 90 | T | L | -0.6038 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3417 | |
| 93 | S | L | -1.1829 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.5724 | |
| 96 | P | L | -0.9179 | |
| 97 | E | L | -1.5267 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -0.6781 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.2174 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | E | L | 0.0000 | |
| 108 | H | L | -0.5235 | |
| 109 | T | L | -0.3542 | |
| 114 | L | L | -0.0699 | |
| 115 | P | L | 0.0000 | |
| 116 | Y | L | 0.0000 | |
| 117 | T | L | -0.8062 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.6056 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.2440 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -2.2496 | |
| 126 | I | L | -1.0162 | |
| 127 | K | L | -1.7107 |