| Chain sequence(s) |
A: MIPGGLTEAKPATIEIQEIANMVKPQLEEKTNETYEEFTAIEYKSQVVAGINYYIKIQTGDNRYIHIKVFKSLPQQSHSLILTGYQVDKTKDDELAGF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 2.0441 | |
| 2 | I | A | 2.4481 | |
| 3 | P | A | 1.2920 | |
| 4 | G | A | 0.7741 | |
| 5 | G | A | 0.6784 | |
| 6 | L | A | 0.2702 | |
| 7 | T | A | -0.3675 | |
| 8 | E | A | -2.0588 | |
| 9 | A | A | -1.7763 | |
| 10 | K | A | -1.6545 | |
| 11 | P | A | -0.6075 | |
| 12 | A | A | -0.4585 | |
| 13 | T | A | -0.0893 | |
| 14 | I | A | 0.6873 | |
| 15 | E | A | -1.4002 | |
| 16 | I | A | 0.0000 | |
| 17 | Q | A | -0.6908 | |
| 18 | E | A | -1.4204 | |
| 19 | I | A | 0.0000 | |
| 20 | A | A | 0.0000 | |
| 21 | N | A | -0.9247 | |
| 22 | M | A | 0.3777 | |
| 23 | V | A | 0.0000 | |
| 24 | K | A | -1.1314 | |
| 25 | P | A | -1.4929 | |
| 26 | Q | A | -1.6389 | |
| 27 | L | A | 0.0000 | |
| 28 | E | A | -3.0616 | |
| 29 | E | A | -3.8254 | |
| 30 | K | A | -3.4528 | |
| 31 | T | A | -2.6241 | |
| 32 | N | A | -3.3687 | |
| 33 | E | A | -3.2873 | |
| 34 | T | A | -2.1887 | |
| 35 | Y | A | 0.0000 | |
| 36 | E | A | -2.6006 | |
| 37 | E | A | -2.5549 | |
| 38 | F | A | 0.0000 | |
| 39 | T | A | -0.7995 | |
| 40 | A | A | 0.0000 | |
| 41 | I | A | -0.1513 | |
| 42 | E | A | -1.1775 | |
| 43 | Y | A | 0.0000 | |
| 44 | K | A | -1.0493 | |
| 45 | S | A | -0.0390 | |
| 46 | Q | A | 1.1016 | |
| 47 | V | A | 2.0355 | |
| 48 | V | A | 1.5695 | |
| 49 | A | A | 0.9051 | |
| 50 | G | A | 0.0000 | |
| 51 | I | A | 1.2187 | |
| 52 | N | A | 0.6627 | |
| 53 | Y | A | 0.2003 | |
| 54 | Y | A | 0.0000 | |
| 55 | I | A | 0.0000 | |
| 56 | K | A | 0.0000 | |
| 57 | I | A | 0.0000 | |
| 58 | Q | A | -1.8310 | |
| 59 | T | A | 0.0000 | |
| 60 | G | A | -2.5781 | |
| 61 | D | A | -3.0923 | |
| 62 | N | A | -3.7235 | |
| 63 | R | A | -3.6202 | |
| 64 | Y | A | 0.0000 | |
| 65 | I | A | 0.0000 | |
| 66 | H | A | 0.0000 | |
| 67 | I | A | 0.0000 | |
| 68 | K | A | 0.0546 | |
| 69 | V | A | 0.0000 | |
| 70 | F | A | 0.8360 | |
| 71 | K | A | 0.0319 | |
| 72 | S | A | -0.4298 | |
| 73 | L | A | -0.5409 | |
| 74 | P | A | -1.3327 | |
| 75 | Q | A | -1.7880 | |
| 76 | Q | A | -1.7464 | |
| 77 | S | A | -1.3617 | |
| 78 | H | A | -1.5318 | |
| 79 | S | A | -0.5220 | |
| 80 | L | A | 0.5185 | |
| 81 | I | A | 0.8967 | |
| 82 | L | A | 0.0000 | |
| 83 | T | A | 0.3447 | |
| 84 | G | A | 0.1341 | |
| 85 | Y | A | 0.2423 | |
| 86 | Q | A | -0.2629 | |
| 87 | V | A | -0.4293 | |
| 88 | D | A | -2.2293 | |
| 89 | K | A | -2.7342 | |
| 90 | T | A | -3.3507 | |
| 91 | K | A | -3.6106 | |
| 92 | D | A | -3.5833 | |
| 93 | D | A | -3.2246 | |
| 94 | E | A | -3.0310 | |
| 95 | L | A | 0.0000 | |
| 96 | A | A | -0.6429 | |
| 97 | G | A | -0.0786 | |
| 98 | F | A | 0.9095 |