Project name: Vunakizumab

Status: done

Started: 2026-03-22 13:07:49
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Chain sequence(s) H: EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYEVHWVRQAPGQGLEWMGVIDPGTGGVAYNQKFEGRVTMTADTSTSTAYMELRSLRSDDTAVYYCTRYSLFYGSSPYAMDYWGQGTLVTVSS
L: EIVLTQSPDFQSVTPKEKVTITCSASSSVNYMHWFQQKPDQSPKLWIYRTSNLASGVPSRFSGSGSGTDYTLTINSLEAEDAATYYCQQRSSYPWTFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:01)
Show buried residues

Minimal score value
-3.882
Maximal score value
2.999
Average score
-0.5578
Total score value
-127.7382

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.1412
2 V H -1.1407
3 Q H -1.3202
4 L H 0.0000
5 V H 0.5280
6 Q H 0.0000
7 S H -0.3739
8 G H -0.4902
9 A H 0.1558
11 E H 0.1554
12 V H 1.0239
13 K H -0.8415
14 K H -2.1528
15 P H -2.3389
16 G H -1.7071
17 A H -1.3780
18 S H -1.4001
19 V H 0.0000
20 K H -1.4077
21 V H 0.0000
22 S H -0.2445
23 C H 0.0000
24 K H -0.5094
25 A H 0.0000
26 S H -0.8747
27 G H -1.2754
28 Y H -0.7447
29 T H -0.5693
30 F H 0.0000
35 T H -1.2209
36 D H -1.5342
37 Y H -0.3181
38 E H -0.4220
39 V H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.5049
45 A H -0.9183
46 P H -0.9508
47 G H -1.2129
48 Q H -1.7699
49 G H -1.1927
50 L H 0.0000
51 E H -0.6168
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 V H 0.3158
56 I H 0.0000
57 D H -1.0061
58 P H 0.0000
59 G H -1.2859
62 T H -0.6349
63 G H -0.7649
64 G H -0.3234
65 V H 0.6804
66 A H 0.3492
67 Y H -0.4104
68 N H -1.4911
69 Q H -2.6022
70 K H -2.8631
71 F H 0.0000
72 E H -2.9872
74 G H -1.8932
75 R H -1.6748
76 V H 0.0000
77 T H -0.5216
78 M H 0.0000
79 T H -0.0767
80 A H -0.4840
81 D H -0.8001
82 T H -0.6073
83 S H -0.4476
84 T H -0.5003
85 S H -0.5548
86 T H 0.0000
87 A H 0.0000
88 Y H -0.1880
89 M H 0.0000
90 E H -0.9569
91 L H 0.0000
92 R H -1.4525
93 S H -1.4427
94 L H 0.0000
95 R H -3.1721
96 S H -2.4201
97 D H -2.5761
98 D H 0.0000
99 T H -0.7947
100 A H 0.0000
101 V H 0.3863
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 T H 0.0000
106 R H 0.0000
107 Y H 0.7546
108 S H 0.0000
109 L H 1.8981
110 F H 2.9990
111 Y H 2.1962
111A G H 0.6525
112B S H 0.7178
112A S H 0.0000
112 P H 0.0000
113 Y H 1.2772
114 A H 0.0000
115 M H 0.0000
116 D H 0.2570
117 Y H 0.2022
118 W H -0.0741
119 G H 0.0000
120 Q H -1.2457
121 G H -0.5495
122 T H 0.0000
123 L H 0.5975
124 V H 0.0000
125 T H -0.1409
126 V H 0.0000
127 S H -1.1809
128 S H -0.8477
1 E L -1.0563
2 I L 0.1785
3 V L 1.1646
4 L L 0.0000
5 T L -0.2211
6 Q L 0.0000
7 S L -0.3782
8 P L -0.3762
9 D L -0.7180
10 F L 0.4825
11 Q L -0.4604
12 S L -0.9506
13 V L 0.0000
14 T L -2.1460
15 P L -2.5244
16 K L -3.4701
17 E L -3.8820
18 K L -3.4719
19 V L 0.0000
20 T L -0.8606
21 I L 0.0000
22 T L -0.6727
23 C L 0.0000
24 S L -0.7701
25 A L 0.0000
26 S L -0.1674
27 S L -0.4610
28 S L -0.9576
29 V L 0.0000
37 N L -1.4326
38 Y L -0.8647
39 M L 0.0000
40 H L 0.0000
41 W L 0.0000
42 F L 0.0000
43 Q L 0.0000
44 Q L -1.0111
45 K L -1.5131
46 P L -1.4826
47 D L -2.4409
48 Q L -2.0186
49 S L -1.1731
50 P L 0.0000
51 K L -0.6413
52 L L -0.0072
53 W L -0.0664
54 I L 0.0000
55 Y L -0.0741
56 R L -0.6777
57 T L -0.7107
65 S L -0.6576
66 N L -0.7310
67 L L -0.0980
68 A L -0.1587
69 S L -0.3583
70 G L -0.4414
71 V L -0.1500
72 P L -0.2567
74 S L -0.5303
75 R L -1.2127
76 F L 0.0000
77 S L -0.6082
78 G L 0.0000
79 S L -0.8843
80 G L -1.3051
83 S L -1.3032
84 G L -1.2792
85 T L -1.4035
86 D L -2.0980
87 Y L 0.0000
88 T L -0.6813
89 L L 0.0000
90 T L -0.8688
91 I L 0.0000
92 N L -2.9174
93 S L -2.9426
94 L L 0.0000
95 E L -2.3718
96 A L -1.7858
97 E L -2.2536
98 D L 0.0000
99 A L -1.4964
100 A L 0.0000
101 T L -0.8566
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 R L 0.1014
108 S L -0.1672
109 S L 0.1077
114 Y L 0.7147
115 P L -0.1930
116 W L 0.0000
117 T L 0.1096
118 F L 0.0000
119 G L 0.0000
120 Q L -1.1537
121 G L 0.0000
122 T L 0.0000
123 K L -1.2401
124 L L 0.0000
125 E L -1.9205
126 I L -1.2672
127 K L -1.9499
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Laboratory of Theory of Biopolymers 2018