| Chain sequence(s) |
H: EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYEVHWVRQAPGQGLEWMGVIDPGTGGVAYNQKFEGRVTMTADTSTSTAYMELRSLRSDDTAVYYCTRYSLFYGSSPYAMDYWGQGTLVTVSS
L: EIVLTQSPDFQSVTPKEKVTITCSASSSVNYMHWFQQKPDQSPKLWIYRTSNLASGVPSRFSGSGSGTDYTLTINSLEAEDAATYYCQQRSSYPWTFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:59)
[INFO] Main: Simulation completed successfully. (00:02:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1412 | |
| 2 | V | H | -1.1407 | |
| 3 | Q | H | -1.3202 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.5280 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.3739 | |
| 8 | G | H | -0.4902 | |
| 9 | A | H | 0.1558 | |
| 11 | E | H | 0.1554 | |
| 12 | V | H | 1.0239 | |
| 13 | K | H | -0.8415 | |
| 14 | K | H | -2.1528 | |
| 15 | P | H | -2.3389 | |
| 16 | G | H | -1.7071 | |
| 17 | A | H | -1.3780 | |
| 18 | S | H | -1.4001 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.4077 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.2445 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.5094 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8747 | |
| 27 | G | H | -1.2754 | |
| 28 | Y | H | -0.7447 | |
| 29 | T | H | -0.5693 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.2209 | |
| 36 | D | H | -1.5342 | |
| 37 | Y | H | -0.3181 | |
| 38 | E | H | -0.4220 | |
| 39 | V | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5049 | |
| 45 | A | H | -0.9183 | |
| 46 | P | H | -0.9508 | |
| 47 | G | H | -1.2129 | |
| 48 | Q | H | -1.7699 | |
| 49 | G | H | -1.1927 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6168 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | V | H | 0.3158 | |
| 56 | I | H | 0.0000 | |
| 57 | D | H | -1.0061 | |
| 58 | P | H | 0.0000 | |
| 59 | G | H | -1.2859 | |
| 62 | T | H | -0.6349 | |
| 63 | G | H | -0.7649 | |
| 64 | G | H | -0.3234 | |
| 65 | V | H | 0.6804 | |
| 66 | A | H | 0.3492 | |
| 67 | Y | H | -0.4104 | |
| 68 | N | H | -1.4911 | |
| 69 | Q | H | -2.6022 | |
| 70 | K | H | -2.8631 | |
| 71 | F | H | 0.0000 | |
| 72 | E | H | -2.9872 | |
| 74 | G | H | -1.8932 | |
| 75 | R | H | -1.6748 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.5216 | |
| 78 | M | H | 0.0000 | |
| 79 | T | H | -0.0767 | |
| 80 | A | H | -0.4840 | |
| 81 | D | H | -0.8001 | |
| 82 | T | H | -0.6073 | |
| 83 | S | H | -0.4476 | |
| 84 | T | H | -0.5003 | |
| 85 | S | H | -0.5548 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.1880 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -0.9569 | |
| 91 | L | H | 0.0000 | |
| 92 | R | H | -1.4525 | |
| 93 | S | H | -1.4427 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -3.1721 | |
| 96 | S | H | -2.4201 | |
| 97 | D | H | -2.5761 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7947 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.3863 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | T | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | Y | H | 0.7546 | |
| 108 | S | H | 0.0000 | |
| 109 | L | H | 1.8981 | |
| 110 | F | H | 2.9990 | |
| 111 | Y | H | 2.1962 | |
| 111A | G | H | 0.6525 | |
| 112B | S | H | 0.7178 | |
| 112A | S | H | 0.0000 | |
| 112 | P | H | 0.0000 | |
| 113 | Y | H | 1.2772 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.2570 | |
| 117 | Y | H | 0.2022 | |
| 118 | W | H | -0.0741 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2457 | |
| 121 | G | H | -0.5495 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 0.5975 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1409 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -1.1809 | |
| 128 | S | H | -0.8477 | |
| 1 | E | L | -1.0563 | |
| 2 | I | L | 0.1785 | |
| 3 | V | L | 1.1646 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.2211 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.3782 | |
| 8 | P | L | -0.3762 | |
| 9 | D | L | -0.7180 | |
| 10 | F | L | 0.4825 | |
| 11 | Q | L | -0.4604 | |
| 12 | S | L | -0.9506 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -2.1460 | |
| 15 | P | L | -2.5244 | |
| 16 | K | L | -3.4701 | |
| 17 | E | L | -3.8820 | |
| 18 | K | L | -3.4719 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.8606 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.6727 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -0.7701 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.1674 | |
| 27 | S | L | -0.4610 | |
| 28 | S | L | -0.9576 | |
| 29 | V | L | 0.0000 | |
| 37 | N | L | -1.4326 | |
| 38 | Y | L | -0.8647 | |
| 39 | M | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | F | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.0111 | |
| 45 | K | L | -1.5131 | |
| 46 | P | L | -1.4826 | |
| 47 | D | L | -2.4409 | |
| 48 | Q | L | -2.0186 | |
| 49 | S | L | -1.1731 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.6413 | |
| 52 | L | L | -0.0072 | |
| 53 | W | L | -0.0664 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.0741 | |
| 56 | R | L | -0.6777 | |
| 57 | T | L | -0.7107 | |
| 65 | S | L | -0.6576 | |
| 66 | N | L | -0.7310 | |
| 67 | L | L | -0.0980 | |
| 68 | A | L | -0.1587 | |
| 69 | S | L | -0.3583 | |
| 70 | G | L | -0.4414 | |
| 71 | V | L | -0.1500 | |
| 72 | P | L | -0.2567 | |
| 74 | S | L | -0.5303 | |
| 75 | R | L | -1.2127 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.6082 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.8843 | |
| 80 | G | L | -1.3051 | |
| 83 | S | L | -1.3032 | |
| 84 | G | L | -1.2792 | |
| 85 | T | L | -1.4035 | |
| 86 | D | L | -2.0980 | |
| 87 | Y | L | 0.0000 | |
| 88 | T | L | -0.6813 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.8688 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -2.9174 | |
| 93 | S | L | -2.9426 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -2.3718 | |
| 96 | A | L | -1.7858 | |
| 97 | E | L | -2.2536 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -1.4964 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8566 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | R | L | 0.1014 | |
| 108 | S | L | -0.1672 | |
| 109 | S | L | 0.1077 | |
| 114 | Y | L | 0.7147 | |
| 115 | P | L | -0.1930 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | 0.1096 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.1537 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.2401 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.9205 | |
| 126 | I | L | -1.2672 | |
| 127 | K | L | -1.9499 |