Project name: 33 MER

Status: done

Started: 2026-06-19 11:05:10
Settings
Chain sequence(s) A: LQLQPFPQPQLPYPQPQLPYPQPQLPYPQPQPF
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:10)
Show buried residues

Minimal score value
-1.4802
Maximal score value
1.463
Average score
-0.0544
Total score value
-1.795

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 1.2304
2 Q A -0.0631
3 L A 1.0115
4 Q A -0.2330
5 P A 0.1260
6 F A 1.2701
7 P A -0.3409
8 Q A -1.1053
9 P A -0.8397
10 Q A -0.8126
11 L A 0.9346
12 P A 0.5701
13 Y A 0.9735
14 P A -0.2955
15 Q A -1.2585
16 P A -0.9344
17 Q A -0.7985
18 L A 0.9296
19 P A 0.5689
20 Y A 0.9569
21 P A -0.2991
22 Q A -1.2594
23 P A -0.9099
24 Q A -0.8165
25 L A 0.9420
26 P A 0.5372
27 Y A 0.9695
28 P A -0.3068
29 Q A -1.4802
30 P A -1.1188
31 Q A -1.2843
32 P A -0.1218
33 F A 1.4630
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Laboratory of Theory of Biopolymers 2018