| Chain sequence(s) |
A: LQLQPFPQPQLPYPQPQLPYPQPQLPYPQPQPF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.2304 | |
| 2 | Q | A | -0.0631 | |
| 3 | L | A | 1.0115 | |
| 4 | Q | A | -0.2330 | |
| 5 | P | A | 0.1260 | |
| 6 | F | A | 1.2701 | |
| 7 | P | A | -0.3409 | |
| 8 | Q | A | -1.1053 | |
| 9 | P | A | -0.8397 | |
| 10 | Q | A | -0.8126 | |
| 11 | L | A | 0.9346 | |
| 12 | P | A | 0.5701 | |
| 13 | Y | A | 0.9735 | |
| 14 | P | A | -0.2955 | |
| 15 | Q | A | -1.2585 | |
| 16 | P | A | -0.9344 | |
| 17 | Q | A | -0.7985 | |
| 18 | L | A | 0.9296 | |
| 19 | P | A | 0.5689 | |
| 20 | Y | A | 0.9569 | |
| 21 | P | A | -0.2991 | |
| 22 | Q | A | -1.2594 | |
| 23 | P | A | -0.9099 | |
| 24 | Q | A | -0.8165 | |
| 25 | L | A | 0.9420 | |
| 26 | P | A | 0.5372 | |
| 27 | Y | A | 0.9695 | |
| 28 | P | A | -0.3068 | |
| 29 | Q | A | -1.4802 | |
| 30 | P | A | -1.1188 | |
| 31 | Q | A | -1.2843 | |
| 32 | P | A | -0.1218 | |
| 33 | F | A | 1.4630 |