| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPLHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPVGHPLPAAPPPSPLYTPPPASSPYAVPPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPKPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9490 | |
| 2 | L | A | 1.9714 | |
| 3 | P | A | 0.6561 | |
| 4 | P | A | 0.3700 | |
| 5 | T | A | 0.1228 | |
| 6 | T | A | 0.1320 | |
| 7 | P | A | 0.1861 | |
| 8 | V | A | 1.2161 | |
| 9 | A | A | 0.0322 | |
| 10 | K | A | -1.1555 | |
| 11 | V | A | -0.4125 | |
| 12 | Q | A | -1.5276 | |
| 13 | S | A | -1.6127 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4445 | |
| 16 | E | A | -2.4508 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4526 | |
| 20 | P | A | 0.1021 | |
| 21 | T | A | 0.1147 | |
| 22 | S | A | -0.1706 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1080 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1719 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7772 | |
| 31 | R | A | -2.6279 | |
| 32 | L | A | -0.7605 | |
| 33 | L | A | 1.2239 | |
| 34 | T | A | 1.4621 | |
| 35 | V | A | 1.9982 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2159 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6065 | |
| 40 | K | A | -1.6092 | |
| 41 | D | A | -0.8669 | |
| 42 | I | A | 0.8423 | |
| 43 | V | A | 1.0310 | |
| 44 | K | A | -1.1829 | |
| 45 | N | A | -1.9260 | |
| 46 | G | A | -1.2329 | |
| 47 | K | A | -0.9359 | |
| 48 | V | A | 1.5116 | |
| 49 | V | A | 2.0672 | |
| 50 | V | A | 1.3084 | |
| 51 | P | A | 0.5002 | |
| 52 | K | A | -0.6105 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1327 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3839 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3054 | |
| 70 | K | A | -1.8177 | |
| 71 | F | A | -0.6656 | |
| 72 | A | A | -0.5647 | |
| 73 | L | A | -0.8498 | |
| 74 | P | A | -1.2553 | |
| 75 | Q | A | -2.4715 | |
| 76 | K | A | -3.0914 | |
| 77 | D | A | -2.9898 | |
| 78 | F | A | -1.6460 | |
| 79 | Y | A | -1.9166 | |
| 80 | D | A | -2.7466 | |
| 81 | P | A | -2.3474 | |
| 82 | E | A | -3.0663 | |
| 83 | K | A | -3.4416 | |
| 84 | E | A | -2.5048 | |
| 85 | R | A | -1.3123 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6448 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9632 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3148 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7366 | |
| 99 | G | A | -0.5350 | |
| 100 | P | A | -0.4307 | |
| 101 | L | A | -0.0157 | |
| 102 | G | A | -0.3239 | |
| 103 | K | A | -0.8350 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4828 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1473 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4266 | |
| 110 | L | A | 0.3116 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0483 | |
| 113 | K | A | -0.3833 | |
| 114 | L | A | -1.0379 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.1252 | |
| 117 | T | A | -0.8970 | |
| 118 | E | A | -1.8841 | |
| 119 | N | A | -2.0811 | |
| 120 | P | A | -1.3273 | |
| 121 | T | A | -0.6903 | |
| 122 | A | A | -0.3342 | |
| 123 | P | A | -0.0584 | |
| 124 | L | A | -0.4359 | |
| 125 | H | A | -1.6721 | |
| 126 | E | A | -2.5282 | |
| 127 | G | A | -2.1526 | |
| 128 | A | A | -1.5637 | |
| 129 | D | A | -2.4661 | |
| 130 | D | A | -2.0679 | |
| 131 | R | A | -1.0984 | |
| 132 | V | A | 0.2363 | |
| 133 | A | A | 0.4435 | |
| 134 | F | A | 0.2756 | |
| 135 | S | A | -0.0741 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7348 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2347 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5731 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2660 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1283 | |
| 157 | D | A | 0.4565 | |
| 158 | L | A | 1.0206 | |
| 159 | A | A | 0.8563 | |
| 160 | P | A | 0.0414 | |
| 161 | P | A | 0.4067 | |
| 162 | C | A | 0.5067 | |
| 163 | P | A | 0.0143 | |
| 164 | G | A | -0.0729 | |
| 165 | L | A | 0.5994 | |
| 166 | P | A | -0.0993 | |
| 167 | P | A | -0.3337 | |
| 168 | G | A | -0.4154 | |
| 169 | A | A | -0.0140 | |
| 170 | C | A | 0.6543 | |
| 171 | P | A | 0.7135 | |
| 172 | P | A | 1.0519 | |
| 173 | I | A | 2.1815 | |
| 174 | Q | A | 1.1579 | |
| 175 | L | A | 1.5057 | |
| 176 | V | A | 0.8339 | |
| 177 | N | A | -0.3551 | |
| 178 | S | A | -0.0134 | |
| 179 | V | A | 0.3645 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3654 | |
| 182 | D | A | 0.0810 | |
| 183 | G | A | -0.1589 | |
| 184 | D | A | -0.5701 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1298 | |
| 190 | F | A | 0.0491 | |
| 191 | G | A | -0.1133 | |
| 192 | N | A | -0.2885 | |
| 193 | M | A | -0.1497 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3491 | |
| 197 | E | A | -2.5070 | |
| 198 | L | A | -1.1962 | |
| 199 | Q | A | -2.4997 | |
| 200 | Q | A | -3.3112 | |
| 201 | D | A | -3.5896 | |
| 202 | R | A | -3.3301 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1936 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3839 | |
| 211 | S | A | -1.8991 | |
| 212 | T | A | -1.4618 | |
| 213 | R | A | -2.1444 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1759 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2858 | |
| 220 | L | A | 0.4566 | |
| 221 | K | A | -1.4001 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9103 | |
| 224 | N | A | -1.6777 | |
| 225 | E | A | -1.3287 | |
| 226 | A | A | -0.6646 | |
| 227 | Y | A | -0.4050 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7211 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0948 | |
| 234 | F | A | 0.2840 | |
| 235 | G | A | -0.8383 | |
| 236 | R | A | -2.6585 | |
| 237 | R | A | -3.0050 | |
| 238 | E | A | -2.1767 | |
| 239 | Q | A | -0.1668 | |
| 240 | V | A | 1.5144 | |
| 241 | Y | A | 1.2100 | |
| 242 | A | A | 0.1057 | |
| 243 | R | A | -1.2521 | |
| 244 | H | A | -1.1456 | |
| 245 | F | A | -0.1061 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.2284 | |
| 249 | C | A | -1.0146 | |
| 250 | G | A | -0.8515 | |
| 251 | P | A | -0.7084 | |
| 252 | V | A | -0.4648 | |
| 253 | G | A | -0.8838 | |
| 254 | H | A | -1.0991 | |
| 255 | P | A | -0.3506 | |
| 256 | L | A | 0.6030 | |
| 257 | P | A | 0.0535 | |
| 258 | A | A | 0.1880 | |
| 259 | A | A | 0.0027 | |
| 260 | P | A | -0.4880 | |
| 261 | P | A | -0.4094 | |
| 262 | P | A | -0.3154 | |
| 263 | S | A | 0.1199 | |
| 264 | P | A | 0.4135 | |
| 265 | L | A | 1.5367 | |
| 266 | Y | A | 0.8673 | |
| 267 | T | A | 0.0944 | |
| 268 | P | A | 0.2322 | |
| 269 | P | A | 0.1606 | |
| 270 | P | A | -0.2663 | |
| 271 | A | A | 0.1476 | |
| 272 | S | A | -0.2075 | |
| 273 | S | A | 0.2285 | |
| 274 | P | A | 0.3221 | |
| 275 | Y | A | 1.3023 | |
| 276 | A | A | 1.0828 | |
| 277 | V | A | 2.0088 | |
| 278 | P | A | 1.1295 | |
| 279 | P | A | 0.3178 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.4565 | |
| 282 | D | A | -0.0661 | |
| 283 | Y | A | 1.1972 | |
| 284 | F | A | 0.8306 | |
| 285 | G | A | 0.1434 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.7802 | |
| 291 | L | A | 1.5811 | |
| 292 | V | A | 0.5657 | |
| 293 | S | A | -0.1682 | |
| 294 | S | A | -0.9715 | |
| 295 | D | A | -1.8449 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1519 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6307 | |
| 301 | R | A | -1.8763 | |
| 302 | P | A | -0.9597 | |
| 303 | F | A | -0.1527 | |
| 304 | W | A | -0.5169 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0788 | |
| 307 | R | A | -2.8280 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3561 | |
| 310 | G | A | -1.2113 | |
| 311 | N | A | -1.3136 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9582 | |
| 319 | N | A | -0.9048 | |
| 320 | E | A | -1.0593 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3903 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2032 | |
| 333 | N | A | 0.3934 | |
| 334 | F | A | 1.4712 | |
| 335 | T | A | 0.7327 | |
| 336 | I | A | 0.3850 | |
| 337 | S | A | -0.8499 | |
| 338 | Q | A | -1.4414 | |
| 339 | Q | A | -1.1207 | |
| 340 | L | A | 0.5723 | |
| 341 | C | A | -0.0327 | |
| 342 | T | A | -0.4181 | |
| 343 | P | A | -1.1305 | |
| 344 | K | A | -1.6088 | |
| 345 | P | A | -0.8700 | |
| 346 | N | A | -0.7064 | |
| 347 | V | A | 1.3066 | |
| 348 | Y | A | 1.2437 | |
| 349 | D | A | 0.0681 | |
| 350 | P | A | -0.3413 | |
| 351 | S | A | -0.2815 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5947 | |
| 354 | K | A | -1.6931 | |
| 355 | N | A | -1.7074 | |
| 356 | Y | A | -0.1199 | |
| 357 | L | A | 0.5602 | |
| 358 | R | A | 0.9026 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4758 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0077 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9227 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6728 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3076 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3272 | |
| 376 | L | A | -1.7632 | |
| 377 | D | A | -2.0445 | |
| 378 | P | A | -1.0674 | |
| 379 | G | A | -1.0240 | |
| 380 | V | A | -0.9350 | |
| 381 | L | A | -0.5482 | |
| 382 | A | A | -0.6663 | |
| 383 | H | A | -0.8521 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4151 | |
| 386 | T | A | -0.5819 | |
| 387 | M | A | -0.3359 | |
| 388 | N | A | -0.8744 | |
| 389 | P | A | -1.2934 | |
| 390 | T | A | -1.5897 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5651 | |
| 393 | E | A | -2.9872 | |
| 394 | N | A | -2.7307 | |
| 395 | W | A | -1.5608 | |
| 396 | N | A | -1.3599 | |
| 397 | L | A | -0.2341 | |
| 398 | G | A | 0.5418 | |
| 399 | F | A | 2.4320 | |
| 400 | V | A | 1.8577 | |
| 401 | P | A | 0.0549 | |
| 402 | P | A | -1.9180 | |
| 403 | K | A | -3.5924 | |
| 404 | E | A | -3.9818 | |
| 405 | R | A | -4.4042 | |
| 406 | E | A | -3.9794 | |
| 407 | D | A | -2.9884 | |
| 408 | P | A | -1.8013 | |
| 409 | Y | A | -0.9816 | |
| 410 | K | A | -2.1027 | |
| 411 | G | A | -0.6190 | |
| 412 | L | A | 0.7537 | |
| 413 | I | A | 1.5857 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3869 | |
| 416 | E | A | -1.6480 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8458 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9033 | |
| 421 | E | A | -2.5107 | |
| 422 | R | A | -2.0222 | |
| 423 | F | A | -1.0320 | |
| 424 | S | A | -1.3309 | |
| 425 | Q | A | -1.8037 | |
| 426 | D | A | -2.9033 | |
| 427 | L | A | -2.0000 | |
| 428 | D | A | -2.7835 | |
| 429 | Q | A | -2.6159 | |
| 430 | F | A | -1.4390 | |
| 431 | A | A | -0.9060 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6077 | |
| 435 | K | A | -0.7529 | |
| 436 | F | A | 0.1381 | |
| 437 | L | A | 1.0233 | |
| 438 | Y | A | 0.8162 | |
| 439 | Q | A | -0.2808 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine