Project name: query_structure

Status: done

Started: 2026-03-16 19:55:23
Settings
Chain sequence(s) A: AKCIKNGKGCREDQGPPFCCSGFCYRQVGWARGYCKNR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:24)
Show buried residues

Minimal score value
-3.8258
Maximal score value
1.1884
Average score
-1.3066
Total score value
-49.651

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.2790
2 K A -1.1858
3 C A -0.0520
4 I A -0.9067
5 K A -2.7494
6 N A -3.1526
7 G A -2.6581
8 K A -3.1089
9 G A -2.3539
10 C A 0.0000
11 R A -3.1711
12 E A -3.5128
13 D A -3.8258
14 Q A -2.8417
15 G A -1.7829
16 P A -0.6933
17 P A 0.0443
18 F A 1.1884
19 C A 0.0000
20 C A 0.1247
21 S A -0.8818
22 G A -0.1225
23 F A -0.6418
24 C A -1.1371
25 Y A -1.3236
26 R A -1.3603
27 Q A -0.3236
28 V A 0.9926
29 G A 0.1387
30 W A -0.1483
31 A A -0.9005
32 R A -2.5577
33 G A 0.0000
34 Y A -1.8931
35 C A 0.0000
36 K A -2.9538
37 N A -2.9973
38 R A -2.6243
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Laboratory of Theory of Biopolymers 2018