| Chain sequence(s) |
A: AKCIKNGKGCREDQGPPFCCSGFCYRQVGWARGYCKNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23)
[INFO] Main: Simulation completed successfully. (00:00:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.2790 | |
| 2 | K | A | -1.1858 | |
| 3 | C | A | -0.0520 | |
| 4 | I | A | -0.9067 | |
| 5 | K | A | -2.7494 | |
| 6 | N | A | -3.1526 | |
| 7 | G | A | -2.6581 | |
| 8 | K | A | -3.1089 | |
| 9 | G | A | -2.3539 | |
| 10 | C | A | 0.0000 | |
| 11 | R | A | -3.1711 | |
| 12 | E | A | -3.5128 | |
| 13 | D | A | -3.8258 | |
| 14 | Q | A | -2.8417 | |
| 15 | G | A | -1.7829 | |
| 16 | P | A | -0.6933 | |
| 17 | P | A | 0.0443 | |
| 18 | F | A | 1.1884 | |
| 19 | C | A | 0.0000 | |
| 20 | C | A | 0.1247 | |
| 21 | S | A | -0.8818 | |
| 22 | G | A | -0.1225 | |
| 23 | F | A | -0.6418 | |
| 24 | C | A | -1.1371 | |
| 25 | Y | A | -1.3236 | |
| 26 | R | A | -1.3603 | |
| 27 | Q | A | -0.3236 | |
| 28 | V | A | 0.9926 | |
| 29 | G | A | 0.1387 | |
| 30 | W | A | -0.1483 | |
| 31 | A | A | -0.9005 | |
| 32 | R | A | -2.5577 | |
| 33 | G | A | 0.0000 | |
| 34 | Y | A | -1.8931 | |
| 35 | C | A | 0.0000 | |
| 36 | K | A | -2.9538 | |
| 37 | N | A | -2.9973 | |
| 38 | R | A | -2.6243 |