| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWDIDEQRDWFDSFLIQYQESEKVGEAIVLTVPGSERSYDLTGLKPGIEYTVSIYGVYHVYRSSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.0740 | |
| 2 | P | A | -0.1567 | |
| 3 | A | A | -0.7594 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.2757 | |
| 6 | N | A | -1.8986 | |
| 7 | L | A | -0.5319 | |
| 8 | V | A | 0.5525 | |
| 9 | V | A | 0.4060 | |
| 10 | S | A | -0.7464 | |
| 11 | R | A | -2.0136 | |
| 12 | V | A | -1.0149 | |
| 13 | T | A | -1.7823 | |
| 14 | E | A | -2.9989 | |
| 15 | D | A | -2.6977 | |
| 16 | S | A | -2.1056 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.2970 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.7308 | |
| 21 | W | A | 0.0000 | |
| 22 | D | A | -2.3679 | |
| 23 | I | A | -2.7005 | |
| 24 | D | A | -3.4111 | |
| 25 | E | A | -3.3937 | |
| 26 | Q | A | -3.3482 | |
| 27 | R | A | -3.6733 | |
| 28 | D | A | -3.4747 | |
| 29 | W | A | -1.5256 | |
| 30 | F | A | 0.0000 | |
| 31 | D | A | -1.7966 | |
| 32 | S | A | -0.9598 | |
| 33 | F | A | 0.0000 | |
| 34 | L | A | 0.7406 | |
| 35 | I | A | 0.0000 | |
| 36 | Q | A | 0.4630 | |
| 37 | Y | A | 0.3391 | |
| 38 | Q | A | -0.8157 | |
| 39 | E | A | -1.7031 | |
| 40 | S | A | -1.4571 | |
| 41 | E | A | -2.2988 | |
| 42 | K | A | -1.7845 | |
| 43 | V | A | 0.1052 | |
| 44 | G | A | -0.9287 | |
| 45 | E | A | -1.6005 | |
| 46 | A | A | -0.3505 | |
| 47 | I | A | 0.7849 | |
| 48 | V | A | 1.5964 | |
| 49 | L | A | 1.1936 | |
| 50 | T | A | 0.4702 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.1086 | |
| 53 | G | A | 0.0000 | |
| 54 | S | A | -1.5953 | |
| 55 | E | A | -1.7009 | |
| 56 | R | A | -1.2636 | |
| 57 | S | A | -0.8960 | |
| 58 | Y | A | -0.7714 | |
| 59 | D | A | -1.7725 | |
| 60 | L | A | 0.0000 | |
| 61 | T | A | -1.4759 | |
| 62 | G | A | -1.4966 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.9215 | |
| 65 | P | A | -2.4355 | |
| 66 | G | A | -1.6717 | |
| 67 | I | A | -1.8921 | |
| 68 | E | A | -1.7655 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | 0.0007 | |
| 71 | V | A | 0.0000 | |
| 72 | S | A | 0.2540 | |
| 73 | I | A | 0.0000 | |
| 74 | Y | A | 0.0104 | |
| 75 | G | A | 0.0000 | |
| 76 | V | A | 0.0990 | |
| 77 | Y | A | -0.0200 | |
| 78 | H | A | -0.0704 | |
| 79 | V | A | 1.5379 | |
| 80 | Y | A | 1.1812 | |
| 81 | R | A | -0.4963 | |
| 82 | S | A | -0.2557 | |
| 83 | S | A | 0.0000 | |
| 84 | N | A | -0.9669 | |
| 85 | P | A | -0.7346 | |
| 86 | L | A | -0.5667 | |
| 87 | S | A | 0.0593 | |
| 88 | A | A | 1.0869 | |
| 89 | I | A | 1.7425 | |
| 90 | F | A | 0.0000 | |
| 91 | T | A | -0.7092 | |
| 92 | T | A | -1.8237 |