Chain sequence(s) |
A: PDKCKKVYENYPVSKCQLANQCNYDCKLDKHARSGECFYDEKRNLQCICDYCEY
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:32) [INFO] Main: Simulation completed successfully. (00:01:33) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | P | A | -1.7275 | |
2 | D | A | -2.9567 | |
3 | K | A | -3.3447 | |
4 | C | A | -2.5965 | |
5 | K | A | -3.2153 | |
6 | K | A | -2.3519 | |
7 | V | A | -0.8860 | |
8 | Y | A | -1.4236 | |
9 | E | A | -2.2718 | |
10 | N | A | -1.9037 | |
11 | Y | A | 0.0000 | |
12 | P | A | -0.6241 | |
13 | V | A | 0.2578 | |
14 | S | A | -0.0476 | |
15 | K | A | -0.4555 | |
16 | C | A | 0.0000 | |
17 | Q | A | -0.4484 | |
18 | L | A | 0.5635 | |
19 | A | A | -0.3767 | |
20 | N | A | -1.3887 | |
21 | Q | A | -1.0518 | |
22 | C | A | 0.0000 | |
23 | N | A | -1.0964 | |
24 | Y | A | -0.5390 | |
25 | D | A | -0.8683 | |
26 | C | A | 0.0000 | |
27 | K | A | -1.3650 | |
28 | L | A | -0.3854 | |
29 | D | A | -2.1246 | |
30 | K | A | -2.5418 | |
31 | H | A | -2.0997 | |
32 | A | A | 0.0000 | |
33 | R | A | -1.2180 | |
34 | S | A | -1.2602 | |
35 | G | A | -1.6152 | |
36 | E | A | -1.7856 | |
37 | C | A | -0.0979 | |
38 | F | A | 0.5758 | |
39 | Y | A | -0.1931 | |
40 | D | A | -2.2877 | |
41 | E | A | -3.4591 | |
42 | K | A | -3.8261 | |
43 | R | A | -3.5565 | |
44 | N | A | -2.3409 | |
45 | L | A | -0.4157 | |
46 | Q | A | -0.4576 | |
47 | C | A | 0.0000 | |
48 | I | A | -0.6822 | |
49 | C | A | 0.0000 | |
50 | D | A | -2.1907 | |
51 | Y | A | -1.4322 | |
52 | C | A | -1.0088 | |
53 | E | A | -1.4503 | |
54 | Y | A | 0.0004 |