Project name: BRZ

Status: done

Started: 2025-08-12 05:52:56
Settings
Chain sequence(s) A: PDKCKKVYENYPVSKCQLANQCNYDCKLDKHARSGECFYDEKRNLQCICDYCEY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:33)
Show buried residues

Minimal score value
-3.8261
Maximal score value
0.5758
Average score
-1.2217
Total score value
-65.971

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 P A -1.7275
2 D A -2.9567
3 K A -3.3447
4 C A -2.5965
5 K A -3.2153
6 K A -2.3519
7 V A -0.8860
8 Y A -1.4236
9 E A -2.2718
10 N A -1.9037
11 Y A 0.0000
12 P A -0.6241
13 V A 0.2578
14 S A -0.0476
15 K A -0.4555
16 C A 0.0000
17 Q A -0.4484
18 L A 0.5635
19 A A -0.3767
20 N A -1.3887
21 Q A -1.0518
22 C A 0.0000
23 N A -1.0964
24 Y A -0.5390
25 D A -0.8683
26 C A 0.0000
27 K A -1.3650
28 L A -0.3854
29 D A -2.1246
30 K A -2.5418
31 H A -2.0997
32 A A 0.0000
33 R A -1.2180
34 S A -1.2602
35 G A -1.6152
36 E A -1.7856
37 C A -0.0979
38 F A 0.5758
39 Y A -0.1931
40 D A -2.2877
41 E A -3.4591
42 K A -3.8261
43 R A -3.5565
44 N A -2.3409
45 L A -0.4157
46 Q A -0.4576
47 C A 0.0000
48 I A -0.6822
49 C A 0.0000
50 D A -2.1907
51 Y A -1.4322
52 C A -1.0088
53 E A -1.4503
54 Y A 0.0004
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Laboratory of Theory of Biopolymers 2018