| Chain sequence(s) |
L: KKVGPQAAAAVGDD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | K | L | -2.3333 | |
| 1 | K | L | -1.7053 | |
| 2 | V | L | 1.4448 | |
| 3 | G | L | 0.0000 | |
| 4 | P | L | -0.4765 | |
| 5 | Q | L | -1.2317 | |
| 6 | A | L | -0.1516 | |
| 7 | A | L | 0.0796 | |
| 8 | A | L | 0.0741 | |
| 9 | A | L | 0.1958 | |
| 10 | V | L | 1.5587 | |
| 11 | G | L | 0.1266 | |
| 12 | D | L | -2.1360 | |
| 13 | D | L | -2.4073 |