| Chain sequence(s) |
L: QVDSVRWMEDLKLMTE
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 160 | Q | L | -0.8804 | |
| 161 | V | L | 1.2230 | |
| 162 | D | L | -1.4965 | |
| 163 | S | L | -0.3777 | |
| 164 | V | L | 0.8429 | |
| 165 | R | L | -1.6534 | |
| 166 | W | L | 0.7447 | |
| 167 | M | L | 0.2216 | |
| 168 | E | L | -1.8760 | |
| 169 | D | L | -0.8203 | |
| 170 | L | L | 0.3457 | |
| 171 | K | L | -1.3017 | |
| 172 | L | L | 1.4283 | |
| 173 | M | L | 1.3875 | |
| 174 | T | L | -0.2165 | |
| 175 | E | L | -1.8331 |