| Chain sequence(s) |
A: EDNCIAEDYGKCTWGGTKCCRGRPCRCSMIGTNCECTPRLIMEGLSFA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:46)
[INFO] Main: Simulation completed successfully. (00:00:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -3.0034 | |
| 2 | D | A | -3.4917 | |
| 3 | N | A | -2.6504 | |
| 4 | C | A | -1.7867 | |
| 5 | I | A | -1.9665 | |
| 6 | A | A | -1.7665 | |
| 7 | E | A | -2.7765 | |
| 8 | D | A | -2.5319 | |
| 9 | Y | A | -1.1191 | |
| 10 | G | A | -2.0965 | |
| 11 | K | A | -3.0220 | |
| 12 | C | A | 0.0000 | |
| 13 | T | A | -1.0349 | |
| 14 | W | A | 0.1373 | |
| 15 | G | A | -0.3535 | |
| 16 | G | A | -1.2364 | |
| 17 | T | A | -1.8816 | |
| 18 | K | A | -2.3944 | |
| 19 | C | A | 0.0000 | |
| 20 | C | A | -1.1345 | |
| 21 | R | A | -2.2683 | |
| 22 | G | A | -1.8708 | |
| 23 | R | A | -1.7519 | |
| 24 | P | A | -1.7238 | |
| 25 | C | A | -1.3249 | |
| 26 | R | A | -2.1125 | |
| 27 | C | A | -0.7481 | |
| 28 | S | A | 0.2379 | |
| 29 | M | A | 1.5512 | |
| 30 | I | A | 2.0767 | |
| 31 | G | A | 0.5088 | |
| 32 | T | A | -0.4120 | |
| 33 | N | A | -1.6810 | |
| 34 | C | A | 0.0000 | |
| 35 | E | A | -2.6225 | |
| 36 | C | A | 0.0000 | |
| 37 | T | A | -1.4421 | |
| 38 | P | A | -1.1128 | |
| 39 | R | A | -1.0323 | |
| 40 | L | A | 1.3410 | |
| 41 | I | A | 2.3698 | |
| 42 | M | A | 1.6549 | |
| 43 | E | A | -0.5286 | |
| 44 | G | A | 0.0190 | |
| 45 | L | A | 1.3994 | |
| 46 | S | A | 1.3077 | |
| 47 | F | A | 2.1623 | |
| 48 | A | A | 1.1761 |