Project name: Emunkitug

Status: done

Started: 2026-03-23 04:15:40
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Chain sequence(s) H: QVQLVQSGAELKKPGASVKVSCKASSYSFTDYNMNWVRQAPGQSLEWMGIIFPKYGTTSYAQKLQGRVTLTTDTSTSTAYMELRSLRSDDTAVYYCATDGGTWYFDVWGTGTTVTVSS
L: DIQLTQSPSFLSASVGDRVTITCRASSSVTYMYWYQQKPGKAPKPWIYLTSNLASGVPSRFSGSGSGTEYTLTISSLQPEDAATYYCQQWSSNPPTFGSGTKLEI
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:05)
Show buried residues

Minimal score value
-3.17
Maximal score value
1.2719
Average score
-0.4873
Total score value
-108.6716

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.2361
2 V H -0.6938
3 Q H -0.7136
4 L H 0.0000
5 V H 0.4698
6 Q H -0.0342
7 S H -0.5248
8 G H -0.5452
9 A H -0.1406
11 E H -0.2566
12 L H 0.6610
13 K H -1.0623
14 K H -2.2303
15 P H -2.1771
16 G H -1.7193
17 A H -1.3950
18 S H -1.5540
19 V H 0.0000
20 K H -1.9690
21 V H 0.0000
22 S H -0.5104
23 C H 0.0000
24 K H -0.6361
25 A H 0.0000
26 S H -0.5043
27 S H -0.5376
28 Y H -0.4218
29 S H -0.5774
30 F H 0.0000
35 T H -1.2428
36 D H -2.0239
37 Y H -0.7173
38 N H -0.3407
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.5624
45 A H -0.9815
46 P H -0.9955
47 G H -1.1937
48 Q H -1.6528
49 S H -0.9749
50 L H 0.0000
51 E H -0.6442
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 I H 0.2566
56 I H 0.0000
57 F H -0.0654
58 P H 0.0000
59 K H -1.3757
62 Y H 0.4230
63 G H -0.2048
64 T H 0.0116
65 T H 0.1517
66 S H -0.2152
67 Y H -0.7656
68 A H 0.0000
69 Q H -2.6708
70 K H -2.6631
71 L H 0.0000
72 Q H -2.3695
74 G H -1.6312
75 R H -1.5229
76 V H 0.0000
77 T H -0.6758
78 L H 0.0000
79 T H -0.1197
80 T H -0.4290
81 D H -0.7007
82 T H -0.7489
83 S H -0.4332
84 T H -0.4837
85 S H -0.5440
86 T H 0.0000
87 A H 0.0000
88 Y H -0.4271
89 M H 0.0000
90 E H -1.2396
91 L H 0.0000
92 R H -1.5937
93 S H -1.5166
94 L H 0.0000
95 R H -3.1700
96 S H -2.3794
97 D H -2.5358
98 D H 0.0000
99 T H -0.9236
100 A H 0.0000
101 V H 0.3047
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 T H 0.0000
107 D H 0.0000
108 G H 0.0000
109 G H -0.4557
110 T H 0.3855
113 W H 1.1934
114 Y H 0.6234
115 F H 0.0000
116 D H -0.3761
117 V H -0.4028
118 W H 0.0000
119 G H 0.0000
120 T H -0.3536
121 G H -0.2867
122 T H 0.0000
123 T H 0.0979
124 V H 0.0000
125 T H -0.4251
126 V H 0.0000
127 S H -0.9968
128 S H -0.8009
1 D L -2.5825
2 I L 0.0000
3 Q L -1.9431
4 L L 0.0000
5 T L -0.9632
6 Q L 0.0000
7 S L -0.0520
8 P L 0.2787
9 S L 0.4414
10 F L 1.2719
11 L L 0.6157
12 S L 0.0845
13 A L -0.2380
14 S L 0.0405
15 V L 0.9060
16 G L -0.5217
17 D L -1.4388
18 R L -2.2375
19 V L 0.0000
20 T L -0.5998
21 I L 0.0000
22 T L -0.6111
23 C L 0.0000
24 R L -1.7644
25 A L 0.0000
26 S L -1.3345
27 S L -1.0574
28 S L -0.6338
29 V L 0.0000
37 T L 0.3589
38 Y L 1.1779
39 M L 0.0000
40 Y L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -1.2882
45 K L -1.5509
46 P L -1.2773
47 G L -1.5113
48 K L -2.3557
49 A L -1.3169
50 P L 0.0000
51 K L -1.4894
52 P L -0.5667
53 W L 0.0000
54 I L 0.0000
55 Y L 0.5985
56 L L 0.8448
57 T L 0.2135
65 S L -0.2291
66 N L -0.4188
67 L L -0.0460
68 A L 0.0000
69 S L -0.4709
70 G L -0.5447
71 V L 0.0000
72 P L -0.3668
74 S L -0.4120
75 R L -0.7063
76 F L 0.0000
77 S L -0.4582
78 G L -0.3347
79 S L -0.6737
80 G L -0.9165
83 S L -0.7204
84 G L -0.8065
85 T L -1.2605
86 E L -1.8507
87 Y L 0.0000
88 T L -0.6419
89 L L 0.0000
90 T L -0.5858
91 I L 0.0000
92 S L -1.2647
93 S L -1.0223
94 L L 0.0000
95 Q L -0.5620
96 P L -0.8994
97 E L -1.9010
98 D L 0.0000
99 A L -1.2384
100 A L 0.0000
101 T L -0.5828
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 W L 0.1674
108 S L -0.1550
109 S L -1.1412
114 N L -1.7202
115 P L -1.4650
116 P L 0.0000
117 T L -0.9535
118 F L 0.0000
119 G L 0.0000
120 S L -0.7679
121 G L 0.0000
122 T L 0.0000
123 K L -0.6214
124 L L 0.0000
125 E L -1.2474
126 I L 0.3419
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Laboratory of Theory of Biopolymers 2018