| Chain sequence(s) |
H: QVQLVQSGAELKKPGASVKVSCKASSYSFTDYNMNWVRQAPGQSLEWMGIIFPKYGTTSYAQKLQGRVTLTTDTSTSTAYMELRSLRSDDTAVYYCATDGGTWYFDVWGTGTTVTVSS
L: DIQLTQSPSFLSASVGDRVTITCRASSSVTYMYWYQQKPGKAPKPWIYLTSNLASGVPSRFSGSGSGTEYTLTISSLQPEDAATYYCQQWSSNPPTFGSGTKLEI input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:04)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.2361 | |
| 2 | V | H | -0.6938 | |
| 3 | Q | H | -0.7136 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.4698 | |
| 6 | Q | H | -0.0342 | |
| 7 | S | H | -0.5248 | |
| 8 | G | H | -0.5452 | |
| 9 | A | H | -0.1406 | |
| 11 | E | H | -0.2566 | |
| 12 | L | H | 0.6610 | |
| 13 | K | H | -1.0623 | |
| 14 | K | H | -2.2303 | |
| 15 | P | H | -2.1771 | |
| 16 | G | H | -1.7193 | |
| 17 | A | H | -1.3950 | |
| 18 | S | H | -1.5540 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.9690 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.5104 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.6361 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.5043 | |
| 27 | S | H | -0.5376 | |
| 28 | Y | H | -0.4218 | |
| 29 | S | H | -0.5774 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.2428 | |
| 36 | D | H | -2.0239 | |
| 37 | Y | H | -0.7173 | |
| 38 | N | H | -0.3407 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5624 | |
| 45 | A | H | -0.9815 | |
| 46 | P | H | -0.9955 | |
| 47 | G | H | -1.1937 | |
| 48 | Q | H | -1.6528 | |
| 49 | S | H | -0.9749 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6442 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | I | H | 0.2566 | |
| 56 | I | H | 0.0000 | |
| 57 | F | H | -0.0654 | |
| 58 | P | H | 0.0000 | |
| 59 | K | H | -1.3757 | |
| 62 | Y | H | 0.4230 | |
| 63 | G | H | -0.2048 | |
| 64 | T | H | 0.0116 | |
| 65 | T | H | 0.1517 | |
| 66 | S | H | -0.2152 | |
| 67 | Y | H | -0.7656 | |
| 68 | A | H | 0.0000 | |
| 69 | Q | H | -2.6708 | |
| 70 | K | H | -2.6631 | |
| 71 | L | H | 0.0000 | |
| 72 | Q | H | -2.3695 | |
| 74 | G | H | -1.6312 | |
| 75 | R | H | -1.5229 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.6758 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.1197 | |
| 80 | T | H | -0.4290 | |
| 81 | D | H | -0.7007 | |
| 82 | T | H | -0.7489 | |
| 83 | S | H | -0.4332 | |
| 84 | T | H | -0.4837 | |
| 85 | S | H | -0.5440 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.4271 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -1.2396 | |
| 91 | L | H | 0.0000 | |
| 92 | R | H | -1.5937 | |
| 93 | S | H | -1.5166 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -3.1700 | |
| 96 | S | H | -2.3794 | |
| 97 | D | H | -2.5358 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.9236 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.3047 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | T | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | G | H | 0.0000 | |
| 109 | G | H | -0.4557 | |
| 110 | T | H | 0.3855 | |
| 113 | W | H | 1.1934 | |
| 114 | Y | H | 0.6234 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.3761 | |
| 117 | V | H | -0.4028 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | T | H | -0.3536 | |
| 121 | G | H | -0.2867 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | 0.0979 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.4251 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.9968 | |
| 128 | S | H | -0.8009 | |
| 1 | D | L | -2.5825 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -1.9431 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.9632 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.0520 | |
| 8 | P | L | 0.2787 | |
| 9 | S | L | 0.4414 | |
| 10 | F | L | 1.2719 | |
| 11 | L | L | 0.6157 | |
| 12 | S | L | 0.0845 | |
| 13 | A | L | -0.2380 | |
| 14 | S | L | 0.0405 | |
| 15 | V | L | 0.9060 | |
| 16 | G | L | -0.5217 | |
| 17 | D | L | -1.4388 | |
| 18 | R | L | -2.2375 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5998 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.6111 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.7644 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.3345 | |
| 27 | S | L | -1.0574 | |
| 28 | S | L | -0.6338 | |
| 29 | V | L | 0.0000 | |
| 37 | T | L | 0.3589 | |
| 38 | Y | L | 1.1779 | |
| 39 | M | L | 0.0000 | |
| 40 | Y | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.2882 | |
| 45 | K | L | -1.5509 | |
| 46 | P | L | -1.2773 | |
| 47 | G | L | -1.5113 | |
| 48 | K | L | -2.3557 | |
| 49 | A | L | -1.3169 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.4894 | |
| 52 | P | L | -0.5667 | |
| 53 | W | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.5985 | |
| 56 | L | L | 0.8448 | |
| 57 | T | L | 0.2135 | |
| 65 | S | L | -0.2291 | |
| 66 | N | L | -0.4188 | |
| 67 | L | L | -0.0460 | |
| 68 | A | L | 0.0000 | |
| 69 | S | L | -0.4709 | |
| 70 | G | L | -0.5447 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -0.3668 | |
| 74 | S | L | -0.4120 | |
| 75 | R | L | -0.7063 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4582 | |
| 78 | G | L | -0.3347 | |
| 79 | S | L | -0.6737 | |
| 80 | G | L | -0.9165 | |
| 83 | S | L | -0.7204 | |
| 84 | G | L | -0.8065 | |
| 85 | T | L | -1.2605 | |
| 86 | E | L | -1.8507 | |
| 87 | Y | L | 0.0000 | |
| 88 | T | L | -0.6419 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5858 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.2647 | |
| 93 | S | L | -1.0223 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.5620 | |
| 96 | P | L | -0.8994 | |
| 97 | E | L | -1.9010 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -1.2384 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.5828 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | W | L | 0.1674 | |
| 108 | S | L | -0.1550 | |
| 109 | S | L | -1.1412 | |
| 114 | N | L | -1.7202 | |
| 115 | P | L | -1.4650 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | -0.9535 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | S | L | -0.7679 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.6214 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.2474 | |
| 126 | I | L | 0.3419 |