Project name: query_structure

Status: done

Started: 2026-03-16 23:33:08
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Chain sequence(s) A: GSSVPTNLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPSSYSTATISGLKPGVDYTITVYAYYYSYYYYYSYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:32)
Show buried residues

Minimal score value
-2.6944
Maximal score value
3.6323
Average score
-0.1046
Total score value
-9.8354

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5861
2 S A -0.3995
3 S A -0.1740
4 V A -0.1345
5 P A 0.0000
6 T A -1.3030
7 N A -2.0860
8 L A 0.0000
9 E A -1.7107
10 V A 0.1677
11 V A 1.5583
12 A A 0.9141
13 A A 0.3002
14 T A -0.1599
15 P A -1.0688
16 T A -0.9686
17 S A -0.5033
18 L A 0.0000
19 L A 0.7977
20 I A 0.0000
21 S A -0.4496
22 W A 0.0000
23 D A -1.8616
24 A A -0.6958
25 S A 0.0000
26 S A -0.5945
27 S A -0.3672
28 S A 0.0553
29 V A 0.0000
30 S A 0.7190
31 Y A 0.4921
32 Y A 0.0000
33 R A -0.5048
34 I A 0.0000
35 T A 0.0000
36 Y A -0.2254
37 G A 0.0000
38 E A -1.5721
39 T A -1.3907
40 G A -1.3545
41 G A -1.1810
42 N A -1.6012
43 S A -0.7461
44 P A -0.1897
45 V A 0.5730
46 Q A -0.7187
47 E A -1.5898
48 F A -0.5737
49 T A -0.2073
50 V A 0.3842
51 P A 0.1762
52 S A 0.2151
53 S A 0.3477
54 Y A 1.0080
55 S A 0.1656
56 T A 0.2363
57 A A 0.0000
58 T A 0.0866
59 I A 0.0000
60 S A -0.6419
61 G A -1.0217
62 L A 0.0000
63 K A -2.3670
64 P A -1.6583
65 G A -1.4173
66 V A -1.5965
67 D A -2.4558
68 Y A 0.0000
69 T A -0.8376
70 I A 0.0000
71 T A 0.0000
72 V A 0.0000
73 Y A 0.1563
74 A A 0.0000
75 Y A 1.4883
76 Y A 2.0978
77 Y A 3.1163
78 S A 2.6544
79 Y A 2.6898
80 Y A 3.1909
81 Y A 3.6323
82 Y A 3.5969
83 Y A 2.8636
84 S A 1.3975
85 Y A 0.7386
86 S A 0.1092
87 P A 0.0408
88 I A -0.0158
89 S A -0.4874
90 I A -0.6770
91 N A -1.8227
92 Y A -1.6183
93 R A -2.6944
94 T A -1.5754
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Laboratory of Theory of Biopolymers 2018