| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGRGSVGHPLFNKLGDTENPTAPQHETADDRVSFSFDPKQTQLFIVGCEPPTGEHWDIAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPEGHPLPDAGPPSPLYVPPPPSSPYAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPENNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9491 | |
| 2 | L | A | 1.9698 | |
| 3 | P | A | 0.6530 | |
| 4 | P | A | 0.3629 | |
| 5 | T | A | 0.1191 | |
| 6 | T | A | 0.1319 | |
| 7 | P | A | 0.1892 | |
| 8 | V | A | 1.2192 | |
| 9 | A | A | 0.0266 | |
| 10 | K | A | -1.1730 | |
| 11 | V | A | -0.4337 | |
| 12 | Q | A | -1.5443 | |
| 13 | S | A | -1.6064 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3972 | |
| 16 | E | A | -2.4284 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4649 | |
| 20 | P | A | 0.1361 | |
| 21 | T | A | 0.1674 | |
| 22 | S | A | -0.0924 | |
| 23 | L | A | 0.1098 | |
| 24 | F | A | -0.0085 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1679 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7751 | |
| 31 | R | A | -2.6232 | |
| 32 | L | A | -0.7525 | |
| 33 | L | A | 1.1746 | |
| 34 | T | A | 1.3534 | |
| 35 | V | A | 1.7892 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2771 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6292 | |
| 40 | K | A | -1.8774 | |
| 41 | D | A | -0.7697 | |
| 42 | I | A | 1.2401 | |
| 43 | V | A | 2.2117 | |
| 44 | V | A | 1.6981 | |
| 45 | N | A | -0.5042 | |
| 46 | G | A | -0.3507 | |
| 47 | K | A | -0.1246 | |
| 48 | V | A | 2.2088 | |
| 49 | L | A | 2.5342 | |
| 50 | V | A | 1.4486 | |
| 51 | P | A | 0.3258 | |
| 52 | K | A | -0.7072 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1008 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4578 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2617 | |
| 70 | K | A | -1.8046 | |
| 71 | F | A | -0.6587 | |
| 72 | A | A | -0.5815 | |
| 73 | L | A | -0.8557 | |
| 74 | P | A | -1.2501 | |
| 75 | Q | A | -2.4842 | |
| 76 | K | A | -3.1037 | |
| 77 | D | A | -2.9953 | |
| 78 | F | A | -1.6499 | |
| 79 | Y | A | -1.9328 | |
| 80 | D | A | -2.7850 | |
| 81 | P | A | -2.3614 | |
| 82 | E | A | -3.0831 | |
| 83 | K | A | -3.4601 | |
| 84 | E | A | -2.5264 | |
| 85 | R | A | -1.3270 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6486 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9775 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3249 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6709 | |
| 99 | G | A | -0.5265 | |
| 100 | P | A | -0.4124 | |
| 101 | L | A | 0.0359 | |
| 102 | G | A | -0.3442 | |
| 103 | R | A | -0.9646 | |
| 104 | G | A | -0.6860 | |
| 105 | S | A | -0.6483 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0765 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3116 | |
| 110 | L | A | 0.2299 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0750 | |
| 113 | K | A | -0.5476 | |
| 114 | L | A | -1.2467 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.5369 | |
| 117 | T | A | -1.3699 | |
| 118 | E | A | -2.6879 | |
| 119 | N | A | -2.4096 | |
| 120 | P | A | -1.7459 | |
| 121 | T | A | -0.9644 | |
| 122 | A | A | -0.7543 | |
| 123 | P | A | -0.5636 | |
| 124 | Q | A | -1.8383 | |
| 125 | H | A | -1.8865 | |
| 126 | E | A | -2.4855 | |
| 127 | T | A | -1.8011 | |
| 128 | A | A | -1.3254 | |
| 129 | D | A | -2.2793 | |
| 130 | D | A | -1.8318 | |
| 131 | R | A | -1.1103 | |
| 132 | V | A | 0.0998 | |
| 133 | S | A | 0.1720 | |
| 134 | F | A | 0.1417 | |
| 135 | S | A | -0.1565 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7517 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5641 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2341 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1440 | |
| 157 | D | A | 0.4973 | |
| 158 | I | A | 1.2316 | |
| 159 | A | A | 0.9221 | |
| 160 | P | A | 0.0735 | |
| 161 | P | A | 0.4276 | |
| 162 | C | A | 0.4934 | |
| 163 | P | A | 0.0005 | |
| 164 | G | A | -0.0867 | |
| 165 | L | A | 0.5720 | |
| 166 | P | A | -0.1078 | |
| 167 | P | A | -0.3369 | |
| 168 | G | A | -0.4167 | |
| 169 | A | A | -0.0129 | |
| 170 | C | A | 0.7473 | |
| 171 | P | A | 0.7820 | |
| 172 | P | A | 1.1588 | |
| 173 | I | A | 2.3476 | |
| 174 | Q | A | 1.2415 | |
| 175 | L | A | 1.5212 | |
| 176 | V | A | 0.8581 | |
| 177 | N | A | -0.2992 | |
| 178 | S | A | 0.0416 | |
| 179 | V | A | 0.4613 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3801 | |
| 182 | D | A | 0.0805 | |
| 183 | G | A | -0.1633 | |
| 184 | D | A | -0.5657 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1589 | |
| 190 | F | A | 0.0547 | |
| 191 | G | A | -0.1076 | |
| 192 | N | A | -0.2876 | |
| 193 | M | A | -0.1453 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4259 | |
| 197 | E | A | -2.6267 | |
| 198 | L | A | -1.2370 | |
| 199 | Q | A | -2.5452 | |
| 200 | Q | A | -3.3468 | |
| 201 | D | A | -3.6070 | |
| 202 | R | A | -3.3458 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2119 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3856 | |
| 211 | S | A | -1.9055 | |
| 212 | T | A | -1.4721 | |
| 213 | R | A | -2.1780 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1784 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3169 | |
| 220 | L | A | 0.5338 | |
| 221 | K | A | -1.2359 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9445 | |
| 224 | N | A | -1.6727 | |
| 225 | E | A | -1.3131 | |
| 226 | A | A | -0.6788 | |
| 227 | Y | A | -0.4501 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7001 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1418 | |
| 234 | F | A | 0.0282 | |
| 235 | G | A | -0.9417 | |
| 236 | R | A | -2.7381 | |
| 237 | R | A | -3.0671 | |
| 238 | E | A | -2.2625 | |
| 239 | Q | A | -0.1848 | |
| 240 | V | A | 1.5716 | |
| 241 | Y | A | 1.2784 | |
| 242 | A | A | 0.2021 | |
| 243 | R | A | -1.2686 | |
| 244 | H | A | -1.1520 | |
| 245 | F | A | -0.1810 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5043 | |
| 249 | C | A | -1.0996 | |
| 250 | G | A | -0.9751 | |
| 251 | P | A | -1.0512 | |
| 252 | E | A | -1.3363 | |
| 253 | G | A | -1.2759 | |
| 254 | H | A | -1.4742 | |
| 255 | P | A | -1.3899 | |
| 256 | L | A | -0.4580 | |
| 257 | P | A | -0.9481 | |
| 258 | D | A | -1.7993 | |
| 259 | A | A | -0.5375 | |
| 260 | G | A | -0.9050 | |
| 261 | P | A | -0.4841 | |
| 262 | P | A | -0.0691 | |
| 263 | S | A | 0.1436 | |
| 264 | P | A | 0.6378 | |
| 265 | L | A | 1.8668 | |
| 266 | Y | A | 1.4476 | |
| 267 | V | A | 1.6910 | |
| 268 | P | A | 0.5115 | |
| 269 | P | A | 0.4777 | |
| 270 | P | A | -0.1603 | |
| 271 | P | A | -0.1376 | |
| 272 | S | A | -0.3094 | |
| 273 | S | A | 0.2552 | |
| 274 | P | A | 0.2357 | |
| 275 | Y | A | 1.0815 | |
| 276 | A | A | 0.9450 | |
| 277 | V | A | 1.5358 | |
| 278 | R | A | 0.1635 | |
| 279 | P | A | -0.6157 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.4747 | |
| 282 | D | A | -0.8170 | |
| 283 | Y | A | 0.9353 | |
| 284 | F | A | 0.7343 | |
| 285 | G | A | 0.1548 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9612 | |
| 291 | L | A | 1.6301 | |
| 292 | V | A | 0.6516 | |
| 293 | S | A | -0.1348 | |
| 294 | S | A | -0.9541 | |
| 295 | D | A | -1.8405 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1612 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6789 | |
| 301 | R | A | -1.9324 | |
| 302 | P | A | -0.9977 | |
| 303 | F | A | -0.2035 | |
| 304 | W | A | -0.5276 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0821 | |
| 307 | R | A | -2.9203 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7802 | |
| 310 | G | A | -1.4216 | |
| 311 | N | A | -1.4007 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9240 | |
| 319 | N | A | -0.8809 | |
| 320 | E | A | -1.0513 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4019 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2258 | |
| 333 | N | A | 0.4395 | |
| 334 | F | A | 1.6901 | |
| 335 | T | A | 0.7415 | |
| 336 | I | A | 0.4292 | |
| 337 | S | A | -1.0588 | |
| 338 | Q | A | -1.9504 | |
| 339 | Q | A | -1.7728 | |
| 340 | L | A | 0.1616 | |
| 341 | S | A | -0.3092 | |
| 342 | T | A | -0.9655 | |
| 343 | P | A | -1.4551 | |
| 344 | E | A | -2.5809 | |
| 345 | N | A | -2.0289 | |
| 346 | N | A | -1.3327 | |
| 347 | V | A | 0.8279 | |
| 348 | Y | A | 1.1552 | |
| 349 | D | A | -0.2694 | |
| 350 | P | A | -0.7596 | |
| 351 | S | A | -0.6547 | |
| 352 | N | A | -0.8477 | |
| 353 | F | A | -1.2177 | |
| 354 | K | A | -2.0952 | |
| 355 | N | A | -1.8522 | |
| 356 | Y | A | -0.1235 | |
| 357 | L | A | 0.6417 | |
| 358 | R | A | 0.9394 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3452 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0285 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9130 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6797 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2819 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3457 | |
| 376 | L | A | -1.7794 | |
| 377 | D | A | -2.0745 | |
| 378 | P | A | -1.0806 | |
| 379 | G | A | -1.0319 | |
| 380 | V | A | -0.9420 | |
| 381 | L | A | -0.5516 | |
| 382 | A | A | -0.6679 | |
| 383 | H | A | -0.8579 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4031 | |
| 386 | T | A | -0.5794 | |
| 387 | M | A | -0.3345 | |
| 388 | N | A | -0.8748 | |
| 389 | P | A | -1.2770 | |
| 390 | T | A | -1.5635 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5444 | |
| 393 | E | A | -2.9520 | |
| 394 | N | A | -2.8943 | |
| 395 | W | A | -1.5430 | |
| 396 | N | A | -1.3965 | |
| 397 | L | A | -0.2382 | |
| 398 | G | A | 0.5198 | |
| 399 | F | A | 2.4140 | |
| 400 | V | A | 1.8327 | |
| 401 | P | A | 0.0519 | |
| 402 | P | A | -1.9343 | |
| 403 | K | A | -3.5728 | |
| 404 | E | A | -4.0467 | |
| 405 | R | A | -4.2998 | |
| 406 | E | A | -3.9222 | |
| 407 | D | A | -2.9074 | |
| 408 | P | A | -1.7803 | |
| 409 | Y | A | -0.9679 | |
| 410 | K | A | -2.0846 | |
| 411 | G | A | -0.6264 | |
| 412 | L | A | 0.6811 | |
| 413 | I | A | 1.5922 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3760 | |
| 416 | E | A | -1.6246 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8232 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8693 | |
| 421 | E | A | -2.4789 | |
| 422 | R | A | -2.0359 | |
| 423 | F | A | -1.0025 | |
| 424 | S | A | -1.2990 | |
| 425 | Q | A | -1.7854 | |
| 426 | D | A | -2.8812 | |
| 427 | L | A | -2.0046 | |
| 428 | D | A | -2.8046 | |
| 429 | Q | A | -2.6222 | |
| 430 | F | A | -1.4673 | |
| 431 | A | A | -0.9319 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6743 | |
| 435 | K | A | -0.7891 | |
| 436 | F | A | 0.1059 | |
| 437 | L | A | 0.9910 | |
| 438 | Y | A | 0.7923 | |
| 439 | Q | A | -0.2834 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine