| Chain sequence(s) |
A: MASTSGVSDVPRDLEVVAATPTSLLISWDAPAVTVHSYYITYQELQHHSVPQGFQVPGSKSTATISGLKPGVAYQIAVYAFTGPGLPPSDAPPIVIYYRTEGSGS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:53)
[INFO] Main: Simulation completed successfully. (00:00:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0207 | |
| 2 | A | A | 0.3932 | |
| 3 | S | A | -0.0797 | |
| 4 | T | A | -0.0404 | |
| 5 | S | A | -0.1776 | |
| 6 | G | A | 0.1402 | |
| 7 | V | A | 1.4080 | |
| 8 | S | A | 0.2007 | |
| 9 | D | A | -0.1315 | |
| 10 | V | A | -0.4405 | |
| 11 | P | A | 0.0000 | |
| 12 | R | A | -3.5512 | |
| 13 | D | A | -3.6302 | |
| 14 | L | A | 0.0000 | |
| 15 | E | A | -1.8539 | |
| 16 | V | A | 0.3626 | |
| 17 | V | A | 1.5272 | |
| 18 | A | A | 0.8840 | |
| 19 | A | A | 0.0127 | |
| 20 | T | A | -0.7378 | |
| 21 | P | A | -1.7151 | |
| 22 | T | A | -1.2333 | |
| 23 | S | A | -0.6895 | |
| 24 | L | A | 0.0000 | |
| 25 | L | A | 0.7201 | |
| 26 | I | A | 0.0000 | |
| 27 | S | A | -1.1533 | |
| 28 | W | A | 0.0000 | |
| 29 | D | A | -3.4140 | |
| 30 | A | A | -1.7116 | |
| 31 | P | A | 0.0000 | |
| 32 | A | A | 0.1207 | |
| 33 | V | A | 0.4836 | |
| 34 | T | A | -0.2111 | |
| 35 | V | A | -0.5645 | |
| 36 | H | A | -1.3015 | |
| 37 | S | A | 0.0000 | |
| 38 | Y | A | 0.0000 | |
| 39 | Y | A | 0.3813 | |
| 40 | I | A | 0.0000 | |
| 41 | T | A | -0.4197 | |
| 42 | Y | A | -0.0318 | |
| 43 | Q | A | -0.6177 | |
| 44 | E | A | -1.0917 | |
| 45 | L | A | -0.3256 | |
| 46 | Q | A | -1.5498 | |
| 47 | H | A | -1.6483 | |
| 48 | H | A | -1.2729 | |
| 49 | S | A | -0.4175 | |
| 50 | V | A | 0.7958 | |
| 51 | P | A | -0.2609 | |
| 52 | Q | A | -0.9355 | |
| 53 | G | A | -0.5628 | |
| 54 | F | A | -0.2282 | |
| 55 | Q | A | -0.7822 | |
| 56 | V | A | 0.0000 | |
| 57 | P | A | -1.1395 | |
| 58 | G | A | -1.1449 | |
| 59 | S | A | -1.1243 | |
| 60 | K | A | -1.8185 | |
| 61 | S | A | -1.2971 | |
| 62 | T | A | -0.6817 | |
| 63 | A | A | 0.0000 | |
| 64 | T | A | 0.2878 | |
| 65 | I | A | 0.0000 | |
| 66 | S | A | -0.6510 | |
| 67 | G | A | -1.0070 | |
| 68 | L | A | 0.0000 | |
| 69 | K | A | -2.4641 | |
| 70 | P | A | -2.0622 | |
| 71 | G | A | -1.8016 | |
| 72 | V | A | 0.0000 | |
| 73 | A | A | -1.1898 | |
| 74 | Y | A | 0.0000 | |
| 75 | Q | A | 0.2044 | |
| 76 | I | A | 0.0000 | |
| 77 | A | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | 0.6302 | |
| 80 | A | A | 0.0000 | |
| 81 | F | A | 0.0000 | |
| 82 | T | A | -0.3079 | |
| 83 | G | A | -0.4659 | |
| 84 | P | A | -0.4626 | |
| 85 | G | A | -0.0679 | |
| 86 | L | A | 1.2313 | |
| 87 | P | A | 0.0722 | |
| 88 | P | A | -0.7089 | |
| 89 | S | A | -0.9396 | |
| 90 | D | A | -2.0397 | |
| 91 | A | A | -0.9439 | |
| 92 | P | A | -0.6002 | |
| 93 | P | A | 0.1922 | |
| 94 | I | A | 0.3022 | |
| 95 | V | A | 1.0359 | |
| 96 | I | A | 0.8786 | |
| 97 | Y | A | 1.1987 | |
| 98 | Y | A | -0.0239 | |
| 99 | R | A | -1.9385 | |
| 100 | T | A | 0.0000 | |
| 101 | E | A | -2.7532 | |
| 102 | G | A | -1.9520 | |
| 103 | S | A | -1.3553 | |
| 104 | G | A | -1.1118 | |
| 105 | S | A | -0.5220 |