Project name: Y32D

Status: done

Started: 2025-12-22 05:02:45
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Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCAVSGLSLTSNSVNWIRQAPGKGLEWVGLIWSNGDTDYNSAIKSRFTISRDTSKSTVYLQMNSLRAEDTAVYYCAREYYGYFDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCLASEGISSDLAWYQQKPGKAPKLLIYGANSLQTGVPSRFSGSGSATDYTLTISSLQPEDFATYYCQQSYKFPNTFGQGTKVEVK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:24)
Show buried residues

Minimal score value
-2.6077
Maximal score value
1.5962
Average score
-0.5269
Total score value
-117.4913

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0347
2 V H -1.0394
3 Q H -1.0541
4 L H 0.0000
5 V H 0.8860
6 E H 0.0000
7 S H -0.2058
8 G H -0.7202
9 G H 0.1076
11 G H 0.7541
12 L H 1.3837
13 V H -0.0643
14 Q H -1.3737
15 P H -1.6438
16 G H -1.4360
17 G H -1.1810
18 S H -0.9973
19 L H -0.6736
20 R H -1.5725
21 L H 0.0000
22 S H -0.2763
23 C H 0.0000
24 A H -0.0497
25 V H 0.0000
26 S H -0.7387
27 G H -1.1407
28 L H -0.4877
29 S H -0.2357
30 L H 0.0000
35 T H -0.5444
36 S H -0.4525
37 N H 0.0000
38 S H 0.0000
39 V H 0.0000
40 N H 0.0000
41 W H 0.0000
42 I H 0.0000
43 R H 0.0000
44 Q H -0.5955
45 A H -1.0095
46 P H -0.8237
47 G H -1.4449
48 K H -2.3499
49 G H -1.5938
50 L H 0.0000
51 E H -0.9904
52 W H 0.0000
53 V H 0.0000
54 G H 0.0000
55 L H 0.0000
56 I H 0.0000
57 W H -0.8449
58 S H -1.0073
59 N H -1.7999
63 G H -1.6825
64 D H -2.2201
65 T H -1.2163
66 D H -0.9396
67 Y H -0.6130
68 N H -0.7855
69 S H -0.8716
70 A H -0.5141
71 I H 0.0000
72 K H -1.7180
74 S H -1.0934
75 R H -0.9863
76 F H 0.0000
77 T H -0.7979
78 I H 0.0000
79 S H -0.6034
80 R H -0.8103
81 D H -1.0863
82 T H -1.0255
83 S H -1.2179
84 K H -1.9948
85 S H -1.1700
86 T H -0.6442
87 V H 0.0000
88 Y H -0.4629
89 L H 0.0000
90 Q H -1.0350
91 M H 0.0000
92 N H -1.2196
93 S H -1.2132
94 L H 0.0000
95 R H -2.3403
96 A H -1.7151
97 E H -2.2484
98 D H 0.0000
99 T H -0.3733
100 A H 0.0000
101 V H 0.7438
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.1827
107 E H 0.4671
108 Y H 1.0361
109 Y H 1.3043
113 G H 0.0000
114 Y H 0.0000
115 F H 0.0000
116 D H 0.0000
117 Y H 0.4097
118 W H -0.1448
119 G H 0.0000
120 Q H -1.2912
121 G H -0.2851
122 T H 0.5305
123 L H 1.5962
124 V H 0.0000
125 T H 0.3457
126 V H 0.0000
127 S H -0.7402
128 S H -0.7051
1 D L -2.2190
2 I L 0.0000
3 Q L -1.8556
4 M L 0.0000
5 T L -0.6872
6 Q L 0.0000
7 S L -0.4969
8 P L -0.6238
9 S L -0.8642
10 S L -1.1112
11 L L -0.7482
12 S L -0.9820
13 A L 0.0000
14 S L -0.2266
15 V L 0.7131
16 G L -0.5398
17 D L -1.2787
18 R L -2.1323
19 V L 0.0000
20 T L -0.6083
21 I L 0.0000
22 T L -0.3659
23 C L 0.0000
24 L L -0.5080
25 A L 0.0000
26 S L -1.2797
27 E L -1.2762
28 G L -0.8714
29 I L 0.0000
36 S L -0.6640
37 S L -1.1473
38 D L -1.1182
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.8861
44 Q L 0.0000
45 K L -1.8279
46 P L -1.2709
47 G L -1.6731
48 K L -2.6077
49 A L -1.5422
50 P L 0.0000
51 K L -1.1318
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.0935
56 G L -0.7002
57 A L 0.0000
65 N L -1.4906
66 S L -0.4693
67 L L 0.0647
68 Q L -0.2185
69 T L -0.1984
70 G L -0.4235
71 V L -0.2605
72 P L -0.3106
74 S L -0.3983
75 R L -0.8057
76 F L 0.0000
77 S L -0.5914
78 G L -0.7708
79 S L -1.1345
80 G L -1.2082
83 S L -1.1927
84 A L -0.9015
85 T L -1.0314
86 D L -1.6129
87 Y L 0.0000
88 T L -0.6786
89 L L 0.0000
90 T L 0.0000
91 I L 0.0000
92 S L -1.3653
93 S L -1.0280
94 L L 0.0000
95 Q L -0.5137
96 P L -0.7540
97 E L -1.7413
98 D L 0.0000
99 F L -0.7554
100 A L 0.0000
101 T L -1.1154
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L 0.0252
108 Y L -0.1242
109 K L -0.7628
114 F L 0.1704
115 P L -0.2464
116 N L 0.0000
117 T L -0.7523
118 F L 0.0000
119 G L 0.0000
120 Q L -1.7776
121 G L 0.0000
122 T L 0.0000
123 K L -1.9136
124 V L 0.0000
125 E L -1.5070
126 V L 0.3666
127 K L -1.0397
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Laboratory of Theory of Biopolymers 2018