| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAVSGLSLTSNSVNWIRQAPGKGLEWVGLIWSNGDTDYNSAIKSRFTISRDTSKSTVYLQMNSLRAEDTAVYYCAREYYGYFDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCLASEGISSDLAWYQQKPGKAPKLLIYGANSLQTGVPSRFSGSGSATDYTLTISSLQPEDFATYYCQQSYKFPNTFGQGTKVEVK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:22)
[INFO] Main: Simulation completed successfully. (00:01:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0347 | |
| 2 | V | H | -1.0394 | |
| 3 | Q | H | -1.0541 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.8860 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2058 | |
| 8 | G | H | -0.7202 | |
| 9 | G | H | 0.1076 | |
| 11 | G | H | 0.7541 | |
| 12 | L | H | 1.3837 | |
| 13 | V | H | -0.0643 | |
| 14 | Q | H | -1.3737 | |
| 15 | P | H | -1.6438 | |
| 16 | G | H | -1.4360 | |
| 17 | G | H | -1.1810 | |
| 18 | S | H | -0.9973 | |
| 19 | L | H | -0.6736 | |
| 20 | R | H | -1.5725 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2763 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0497 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -0.7387 | |
| 27 | G | H | -1.1407 | |
| 28 | L | H | -0.4877 | |
| 29 | S | H | -0.2357 | |
| 30 | L | H | 0.0000 | |
| 35 | T | H | -0.5444 | |
| 36 | S | H | -0.4525 | |
| 37 | N | H | 0.0000 | |
| 38 | S | H | 0.0000 | |
| 39 | V | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5955 | |
| 45 | A | H | -1.0095 | |
| 46 | P | H | -0.8237 | |
| 47 | G | H | -1.4449 | |
| 48 | K | H | -2.3499 | |
| 49 | G | H | -1.5938 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9904 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | L | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | W | H | -0.8449 | |
| 58 | S | H | -1.0073 | |
| 59 | N | H | -1.7999 | |
| 63 | G | H | -1.6825 | |
| 64 | D | H | -2.2201 | |
| 65 | T | H | -1.2163 | |
| 66 | D | H | -0.9396 | |
| 67 | Y | H | -0.6130 | |
| 68 | N | H | -0.7855 | |
| 69 | S | H | -0.8716 | |
| 70 | A | H | -0.5141 | |
| 71 | I | H | 0.0000 | |
| 72 | K | H | -1.7180 | |
| 74 | S | H | -1.0934 | |
| 75 | R | H | -0.9863 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7979 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.6034 | |
| 80 | R | H | -0.8103 | |
| 81 | D | H | -1.0863 | |
| 82 | T | H | -1.0255 | |
| 83 | S | H | -1.2179 | |
| 84 | K | H | -1.9948 | |
| 85 | S | H | -1.1700 | |
| 86 | T | H | -0.6442 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.4629 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0350 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2196 | |
| 93 | S | H | -1.2132 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.3403 | |
| 96 | A | H | -1.7151 | |
| 97 | E | H | -2.2484 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3733 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7438 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.1827 | |
| 107 | E | H | 0.4671 | |
| 108 | Y | H | 1.0361 | |
| 109 | Y | H | 1.3043 | |
| 113 | G | H | 0.0000 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.4097 | |
| 118 | W | H | -0.1448 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2912 | |
| 121 | G | H | -0.2851 | |
| 122 | T | H | 0.5305 | |
| 123 | L | H | 1.5962 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3457 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7402 | |
| 128 | S | H | -0.7051 | |
| 1 | D | L | -2.2190 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -1.8556 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.6872 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.4969 | |
| 8 | P | L | -0.6238 | |
| 9 | S | L | -0.8642 | |
| 10 | S | L | -1.1112 | |
| 11 | L | L | -0.7482 | |
| 12 | S | L | -0.9820 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.2266 | |
| 15 | V | L | 0.7131 | |
| 16 | G | L | -0.5398 | |
| 17 | D | L | -1.2787 | |
| 18 | R | L | -2.1323 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6083 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.3659 | |
| 23 | C | L | 0.0000 | |
| 24 | L | L | -0.5080 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.2797 | |
| 27 | E | L | -1.2762 | |
| 28 | G | L | -0.8714 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.6640 | |
| 37 | S | L | -1.1473 | |
| 38 | D | L | -1.1182 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.8861 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.8279 | |
| 46 | P | L | -1.2709 | |
| 47 | G | L | -1.6731 | |
| 48 | K | L | -2.6077 | |
| 49 | A | L | -1.5422 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.1318 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.0935 | |
| 56 | G | L | -0.7002 | |
| 57 | A | L | 0.0000 | |
| 65 | N | L | -1.4906 | |
| 66 | S | L | -0.4693 | |
| 67 | L | L | 0.0647 | |
| 68 | Q | L | -0.2185 | |
| 69 | T | L | -0.1984 | |
| 70 | G | L | -0.4235 | |
| 71 | V | L | -0.2605 | |
| 72 | P | L | -0.3106 | |
| 74 | S | L | -0.3983 | |
| 75 | R | L | -0.8057 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.5914 | |
| 78 | G | L | -0.7708 | |
| 79 | S | L | -1.1345 | |
| 80 | G | L | -1.2082 | |
| 83 | S | L | -1.1927 | |
| 84 | A | L | -0.9015 | |
| 85 | T | L | -1.0314 | |
| 86 | D | L | -1.6129 | |
| 87 | Y | L | 0.0000 | |
| 88 | T | L | -0.6786 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3653 | |
| 93 | S | L | -1.0280 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.5137 | |
| 96 | P | L | -0.7540 | |
| 97 | E | L | -1.7413 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.7554 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.1154 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | 0.0252 | |
| 108 | Y | L | -0.1242 | |
| 109 | K | L | -0.7628 | |
| 114 | F | L | 0.1704 | |
| 115 | P | L | -0.2464 | |
| 116 | N | L | 0.0000 | |
| 117 | T | L | -0.7523 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.7776 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.9136 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.5070 | |
| 126 | V | L | 0.3666 | |
| 127 | K | L | -1.0397 |