Project name: c5695bf6685fe31

Status: done

Started: 2026-06-25 14:46:25
Settings
Chain sequence(s) R: LHCVGDTYPSNDRCCHECRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSSDAIC
T: LHCVGDTYPSNDRCCHECRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQACKPWTNCTLATLQPASNSSDAIC
G: DPPIQRLRGAVTRCEDGQLFISSYKNEYQTMEVQNNSVVIKCDGLYIIYLKGSFFQEVKIDLHFREDHNPISIPMLNDGRRIVFTVVASLAFKDKVYLTVNAPDTLCEHLQINDGELIVVQLTPGYCAPEGSYH
F: DPPIQRLRGAVTRCEDGQLFISSYKNEYQTMEVQNNSVVIKCDGLYIIYLKGSFFQEVKIDLHFREDHNPISIPMLNDGRRIVFTVVASLAFKDKVYLTVNAPDTLCEHLQINDGELIVVQLTPGYCAPEGSYHS
input PDB
Selected Chain(s) R,T,G,F
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:08:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:08:07)
Show buried residues

Minimal score value
-3.7614
Maximal score value
2.1979
Average score
-0.6422
Total score value
-348.0808

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
57 D F -1.6888
58 P F -0.7577
59 P F 0.2383
60 I F 1.8308
61 Q F 0.0000
62 R F 0.3227
63 L F 0.0000
64 R F -0.7857
65 G F 0.0000
66 A F -0.7902
67 V F 0.0000
68 T F -1.5677
69 R F -2.4096
70 C F 0.0000
71 E F -3.3017
72 D F -3.2325
73 G F -2.4071
74 Q F -1.6715
75 L F 0.0000
76 F F -0.8603
77 I F 0.0000
78 S F -0.3702
79 S F -0.7504
80 Y F -0.8991
81 K F -2.2504
82 N F -2.2574
83 E F -1.9875
84 Y F -0.1453
85 Q F -0.8832
86 T F -0.2835
87 M F 0.0000
88 E F -1.1244
89 V F -0.9492
90 Q F -1.7455
91 N F -1.8162
92 N F -1.4181
93 S F 0.0000
94 V F 0.0000
95 V F -0.6741
96 I F 0.0000
97 K F -0.6843
98 C F 0.0000
99 D F -0.3755
100 G F 0.4298
101 L F 1.1924
102 Y F 0.0000
103 I F 1.6956
104 I F 0.0000
105 Y F 0.8555
106 L F 0.0000
107 K F -0.7450
108 G F 0.0000
109 S F -2.0177
110 F F 0.0000
111 F F 0.3375
112 Q F -1.0180
113 E F -2.6639
114 V F 0.0000
115 K F -2.4125
116 I F 0.0000
117 D F 0.0000
118 L F 0.0000
119 H F 0.0000
120 F F 0.0000
121 R F -2.2968
122 E F -3.1872
123 D F -2.9311
124 H F -2.1081
125 N F -1.7952
126 P F -0.7371
127 I F 0.1991
128 S F -0.5128
129 I F 0.0000
130 P F -0.4109
131 M F -1.2540
132 L F -0.8490
133 N F -1.8733
134 D F -2.2736
135 G F -2.2762
136 R F -2.7858
137 R F -2.4118
138 I F 0.0000
139 V F 0.7752
140 F F 0.6368
141 T F 0.9059
142 V F 1.2770
143 V F 2.1205
144 A F 1.1000
145 S F 0.3924
146 L F 0.0000
147 A F 0.0000
148 F F -0.0932
149 K F -0.4648
150 D F 0.0000
151 K F -1.2367
152 V F 0.0000
153 Y F -0.4073
154 L F 0.0000
155 T F -0.9912
156 V F 0.0000
157 N F -1.7249
158 A F -1.2459
159 P F -1.4692
160 D F -3.0882
161 T F -1.7509
162 L F -1.5288
163 C F 0.0000
164 E F -3.7614
165 H F -2.6754
166 L F 0.0000
167 Q F -1.9747
168 I F 0.0000
169 N F -2.5792
170 D F -2.7592
171 G F -1.9756
172 E F -1.0700
173 L F 0.0000
174 I F 0.1049
175 V F 0.0000
176 V F 1.2050
177 Q F 0.0000
178 L F 1.8047
179 T F 0.7347
180 P F 0.0119
181 G F -0.2943
182 Y F -0.3331
183 C F -0.5451
184 A F -0.5831
185 P F -1.0542
186 E F -2.2103
187 G F -1.4496
188 S F 0.0000
189 Y F -0.3652
190 H F -0.7496
191 S F -0.4165
57 D G -1.7325
58 P G -0.8425
59 P G 0.0671
60 I G 1.5357
61 Q G 0.0000
62 R G 0.1402
63 L G 0.0000
64 R G -0.7301
65 G G 0.0000
66 A G -0.6728
67 V G 0.0000
68 T G -1.4704
69 R G -2.2662
70 C G 0.0000
71 E G -3.0981
72 D G -3.1223
73 G G -2.2976
74 Q G -1.6012
75 L G 0.0000
76 F G -0.7005
77 I G 0.0000
78 S G -0.3157
79 S G -0.7973
80 Y G -1.0330
81 K G -2.4175
82 N G -2.5791
83 E G -2.1435
84 Y G -0.2597
85 Q G -1.1436
86 T G -0.5232
87 M G -0.8590
88 E G -2.1719
89 V G -1.4556
90 Q G -1.9452
91 N G -1.8859
92 N G -1.4924
93 S G 0.0000
94 V G 0.0000
95 V G 0.0000
96 I G 0.0000
97 K G -1.3190
98 C G 0.0000
99 D G -0.5082
100 G G 0.1318
101 L G 1.1286
102 Y G 0.0000
103 I G 1.6949
104 I G 0.0000
105 Y G 0.8976
106 L G 0.0000
107 K G -0.8812
108 G G 0.0000
109 S G -1.8467
110 F G 0.0000
111 F G 0.2773
112 Q G -1.2822
113 E G -3.0466
114 V G 0.0000
115 K G -2.5260
116 I G 0.0000
117 D G 0.0000
118 L G 0.0000
119 H G 0.0000
120 F G 0.0000
121 R G -2.2158
122 E G -3.1585
123 D G -3.1942
124 H G -2.3262
125 N G -1.9459
126 P G -0.8867
127 I G 0.2099
128 S G -0.5172
129 I G 0.0000
130 P G -0.1806
131 M G -1.1720
132 L G -1.1054
133 N G -2.7955
134 D G -3.2051
135 G G -2.9438
136 R G -2.9748
137 R G -2.5681
138 I G 0.0000
139 V G 0.8054
140 F G 0.6155
141 T G 0.8993
142 V G 1.2368
143 V G 2.0067
144 A G 1.0309
145 S G 0.3511
146 L G 0.0000
147 A G 0.0000
148 F G 0.0000
149 K G -0.7013
150 D G 0.0000
151 K G -1.3289
152 V G 0.0000
153 Y G -0.3891
154 L G 0.0000
155 T G -0.9679
156 V G 0.0000
157 N G -1.7553
158 A G -1.1581
159 P G -1.2966
160 D G -2.8290
161 T G -1.3670
162 L G -0.9020
163 C G 0.0000
164 E G -3.4906
165 H G -2.4290
166 L G 0.0000
167 Q G -1.9619
168 I G 0.0000
169 N G -2.6270
170 D G -2.7870
171 G G -1.9481
172 E G -0.8932
173 L G 0.0000
174 I G 0.2719
175 V G 0.0000
176 V G 1.1916
177 Q G 0.0000
178 L G 1.5826
179 T G 0.6118
180 P G 0.1369
181 G G -0.3321
182 Y G -0.2131
183 C G -0.6623
184 A G 0.0000
185 P G -1.2526
186 E G -2.0043
187 G G -1.4086
188 S G 0.0000
189 Y G -0.2766
190 H G -0.6442
29 L R 0.4327
30 H R -0.4311
31 C R 0.0000
32 V R 0.8539
33 G R -0.3963
34 D R -1.4909
35 T R -0.8203
36 Y R 0.0000
37 P R 0.0000
38 S R -1.1496
39 N R -1.9055
40 D R -2.2957
41 R R -1.5613
42 C R -0.4977
43 C R 0.0000
44 H R -1.7111
45 E R 0.0000
46 C R 0.0000
47 R R -2.3076
48 P R -1.2517
49 G R -1.1476
50 N R -1.3350
51 G R 0.0000
52 M R 0.0000
53 V R 0.7289
54 S R -0.0514
55 R R -0.5186
56 C R 0.0000
57 S R -1.9184
58 R R -2.8423
59 S R -1.9523
60 Q R -2.2768
61 N R -2.1822
62 T R -0.7197
63 V R -0.1491
64 C R -0.8420
65 R R -1.7979
66 P R -1.3942
67 C R -0.8007
68 G R -0.6993
69 P R -0.2820
70 G R -0.1545
71 F R -0.0149
72 Y R 0.0000
73 N R 0.0000
74 D R -1.7239
75 V R -0.4079
76 V R -0.6861
77 S R -0.7519
78 S R -0.5419
79 K R -0.6208
80 P R -0.7222
81 C R -1.0776
82 K R -1.5463
83 P R -0.4980
84 C R 0.2272
85 T R 0.5925
86 W R 1.3337
87 C R 0.2178
88 N R -0.4518
89 L R -0.5726
90 R R -1.8507
91 S R -1.1324
92 G R 0.0000
93 S R 0.0000
94 E R 0.0000
95 R R -0.5892
96 K R -1.5181
97 Q R -0.9511
98 L R 0.4270
99 C R 0.5350
100 T R -0.1121
101 A R -0.6180
102 T R -0.9993
103 Q R -0.8729
104 D R 0.0000
105 T R 0.3599
106 V R -0.1251
107 C R 0.0000
108 R R -1.7400
109 C R 0.0000
110 R R -1.1313
111 A R -1.3763
112 G R 0.0000
113 T R 0.0000
114 Q R -0.9650
115 P R -0.6994
116 L R 0.4585
117 D R -1.0110
118 S R -0.5797
119 Y R -0.5024
120 K R -0.7827
121 P R -0.7984
122 G R 0.0000
123 V R -0.1824
124 D R -0.9012
125 C R 0.0000
126 A R -0.1776
127 P R -0.4052
128 C R 0.0000
129 P R -0.8027
130 P R -0.5978
131 G R -0.8054
132 H R -1.2511
133 F R 0.0000
134 S R 0.0000
135 P R -1.4516
136 G R 0.0000
137 D R -2.4901
138 N R -1.6629
139 Q R -1.8751
140 A R -0.9847
141 C R -1.2641
142 K R -1.9928
143 P R -1.2102
144 W R -0.6032
145 T R -0.3878
146 N R -0.9564
147 C R 0.0000
148 T R -0.4951
149 L R 0.5780
150 A R -0.2461
151 G R -0.9863
152 K R -1.6534
153 H R -1.1267
154 T R 0.0908
155 L R 1.4689
156 Q R 0.8488
157 P R 0.2543
158 A R -0.2726
159 S R -0.6752
160 N R -1.2380
161 S R 0.0000
162 S R -0.8222
163 D R -0.6820
164 A R 0.4747
165 I R 1.1761
166 C R 0.6348
29 L T 0.3110
30 H T -0.2260
31 C T 0.0000
32 V T 0.6986
33 G T -0.8057
34 D T -1.7263
35 T T 0.0000
36 Y T 0.0000
37 P T 0.0000
38 S T 0.0000
39 N T -1.6844
40 D T -1.8290
41 R T 0.0000
42 C T -0.1643
43 C T 0.0000
44 H T -0.9449
45 E T 0.0000
46 C T 0.0000
47 R T -1.8436
48 P T -1.0865
49 G T 0.0000
50 N T 0.0000
51 G T 0.0000
52 M T 0.0000
53 V T 1.3509
54 S T 0.4564
55 R T 0.0529
56 C T 0.0000
57 S T -1.6927
58 R T -2.6140
59 S T -1.6732
60 Q T -1.7238
61 N T -1.4512
62 T T -0.1732
63 V T 0.2070
64 C T -0.3885
65 R T -1.4758
66 P T -1.2358
67 C T 0.0000
68 G T -0.4952
69 P T 0.1059
70 G T -0.0052
71 F T 0.3210
72 Y T 0.0000
73 N T 0.0000
74 D T -1.7144
75 V T -0.7730
76 V T -0.6764
77 S T 0.0000
78 S T -0.3038
79 K T -0.3362
80 P T -0.3469
81 C T -0.5103
82 K T -0.8697
83 P T -0.1999
84 C T 0.0000
85 T T 0.6602
86 W T 1.0374
87 C T -0.5146
88 N T -0.6210
89 L T -0.2527
90 R T -1.4921
91 S T -1.1056
92 G T 0.0000
93 S T 0.0000
94 E T -3.1770
95 R T -3.0526
96 K T -3.4109
97 Q T -1.9493
98 L T 0.2931
99 C T 0.1987
100 T T 0.0300
101 A T -0.4931
102 T T -0.8991
103 Q T -0.9221
104 D T 0.0000
105 T T 0.0000
106 V T -1.1896
107 C T 0.0000
108 R T -3.0328
109 C T 0.0000
110 R T -2.0169
111 A T -1.3034
112 G T 0.0000
113 T T -1.0534
114 Q T -1.1189
115 P T -0.9474
116 L T 0.2242
117 D T -1.3515
118 S T -0.6883
119 Y T -0.1749
120 K T -0.9908
121 P T -1.0410
122 G T 0.0000
123 V T -0.7844
124 D T -1.2047
125 C T 0.0000
126 A T -0.3789
127 P T -0.6113
128 C T 0.0000
129 P T -0.7584
130 P T -0.6042
131 G T -0.8375
132 H T -1.0370
133 F T -1.0627
134 S T 0.0000
135 P T -1.3710
136 G T 0.0000
137 D T -3.0536
138 N T -1.8091
139 Q T -1.9146
140 A T -1.0264
141 C T -1.0039
142 K T -1.4978
143 P T -1.0006
144 W T -0.6462
145 T T -0.1777
146 N T -0.4901
147 C T 0.7195
148 T T 0.4416
149 L T 1.2511
150 A T 0.6191
154 T T 1.0255
155 L T 1.8874
156 Q T 0.3949
157 P T -0.0227
158 A T -0.3653
159 S T -0.8375
160 N T -1.0945
161 S T -0.8400
162 S T -0.6891
163 D T -0.5757
164 A T 0.6854
165 I T 2.1979
166 C T 1.8062
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Laboratory of Theory of Biopolymers 2018