| Chain sequence(s) |
A: LRPRDLISNINVIVLELKGFMCEYADETATIVEFLNRWITFCQSIISTLT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:55)
[INFO] Main: Simulation completed successfully. (00:00:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 80 | L | A | 0.4271 | |
| 81 | R | A | -1.4139 | |
| 82 | P | A | -1.1639 | |
| 83 | R | A | -1.9655 | |
| 84 | D | A | -1.3098 | |
| 85 | L | A | 0.0286 | |
| 86 | I | A | 0.9562 | |
| 87 | S | A | 0.1411 | |
| 88 | N | A | 0.1297 | |
| 89 | I | A | 1.9561 | |
| 90 | N | A | 0.8784 | |
| 91 | V | A | 2.1057 | |
| 92 | I | A | 1.9415 | |
| 93 | V | A | 1.6182 | |
| 94 | L | A | 1.3335 | |
| 95 | E | A | -0.2017 | |
| 96 | L | A | 0.8890 | |
| 97 | K | A | -0.6014 | |
| 98 | G | A | -0.6605 | |
| 103 | F | A | 2.1578 | |
| 104 | M | A | 2.0453 | |
| 105 | C | A | 1.2205 | |
| 106 | E | A | -0.5235 | |
| 107 | Y | A | 0.0340 | |
| 108 | A | A | -1.1715 | |
| 109 | D | A | -2.5469 | |
| 110 | E | A | -2.5019 | |
| 111 | T | A | -1.0201 | |
| 112 | A | A | -0.0233 | |
| 113 | T | A | 1.3189 | |
| 114 | I | A | 2.7522 | |
| 115 | V | A | 2.0918 | |
| 116 | E | A | 0.0487 | |
| 117 | F | A | 1.8141 | |
| 118 | L | A | 2.0182 | |
| 119 | N | A | 0.0631 | |
| 120 | R | A | -0.5141 | |
| 121 | W | A | 0.9741 | |
| 122 | I | A | 1.6646 | |
| 123 | T | A | 0.8339 | |
| 124 | F | A | 1.7615 | |
| 125 | C | A | 1.6249 | |
| 126 | Q | A | 0.8144 | |
| 127 | S | A | 1.3437 | |
| 128 | I | A | 2.1995 | |
| 129 | I | A | 2.6882 | |
| 130 | S | A | 1.1809 | |
| 131 | T | A | 1.2952 | |
| 132 | L | A | 2.2329 | |
| 133 | T | A | 1.1248 |