| Chain sequence(s) |
A: FFKGHGG
C: FFKGHGG B: FFKGHGG E: FFKGHGG D: FFKGHGG G: FFKGHGG F: FFKGHGG I: FFKGHGG H: FFKGHGG K: FFKGHGG J: FFKGHGG M: FFKGHGG L: FFKGHGG O: FFKGHGG N: FFKGHGG Q: FFKGHGG P: FFKGHGG S: FFKGHGG R: FFKGHGG T: FFKGHGG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:13:25)
[INFO] Main: Simulation completed successfully. (00:13:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.9250 | |
| 2 | F | A | 3.4784 | |
| 3 | K | A | 0.0000 | |
| 4 | G | A | 0.2305 | |
| 5 | H | A | -0.8303 | |
| 6 | G | A | -1.5049 | |
| 7 | G | A | -1.1624 | |
| 1 | F | B | 3.1935 | |
| 2 | F | B | 0.0000 | |
| 3 | K | B | 1.3421 | |
| 4 | G | B | -0.5561 | |
| 5 | H | B | -1.3760 | |
| 6 | G | B | -1.6556 | |
| 7 | G | B | -1.2625 | |
| 1 | F | C | 2.5716 | |
| 2 | F | C | 2.2865 | |
| 3 | K | C | -0.3482 | |
| 4 | G | C | -0.9432 | |
| 5 | H | C | -1.9509 | |
| 6 | G | C | -1.9942 | |
| 7 | G | C | -1.4047 | |
| 1 | F | D | 0.8336 | |
| 2 | F | D | 2.3437 | |
| 3 | K | D | -0.0871 | |
| 4 | G | D | -0.7471 | |
| 5 | H | D | -1.7338 | |
| 6 | G | D | -1.6453 | |
| 7 | G | D | -1.2941 | |
| 1 | F | E | 3.7823 | |
| 2 | F | E | 0.5999 | |
| 3 | K | E | -2.0656 | |
| 4 | G | E | -2.2728 | |
| 5 | H | E | -2.3952 | |
| 6 | G | E | -1.7570 | |
| 7 | G | E | -1.6196 | |
| 1 | F | F | 4.3376 | |
| 2 | F | F | 2.6222 | |
| 3 | K | F | -0.8995 | |
| 4 | G | F | 0.0000 | |
| 5 | H | F | -2.3722 | |
| 6 | G | F | -1.5015 | |
| 7 | G | F | -0.8253 | |
| 1 | F | G | 4.0240 | |
| 2 | F | G | 3.0864 | |
| 3 | K | G | 0.9483 | |
| 4 | G | G | 0.0000 | |
| 5 | H | G | -0.5386 | |
| 6 | G | G | -0.6856 | |
| 7 | G | G | -0.3629 | |
| 1 | F | H | 2.2784 | |
| 2 | F | H | 2.0041 | |
| 3 | K | H | -0.8913 | |
| 4 | G | H | -1.0418 | |
| 5 | H | H | -1.7921 | |
| 6 | G | H | -1.6957 | |
| 7 | G | H | -0.9604 | |
| 1 | F | I | 3.1992 | |
| 2 | F | I | 2.9731 | |
| 3 | K | I | 0.0000 | |
| 4 | G | I | 0.3568 | |
| 5 | H | I | -1.8173 | |
| 6 | G | I | -1.3515 | |
| 7 | G | I | -1.0205 | |
| 1 | F | J | 0.3741 | |
| 2 | F | J | 1.7403 | |
| 3 | K | J | 0.8225 | |
| 4 | G | J | 0.0000 | |
| 5 | H | J | -0.2891 | |
| 6 | G | J | -0.3485 | |
| 7 | G | J | -0.5213 | |
| 1 | F | K | 2.8284 | |
| 2 | F | K | 0.0000 | |
| 3 | K | K | 0.0000 | |
| 4 | G | K | -0.5278 | |
| 5 | H | K | -1.3245 | |
| 6 | G | K | -1.3359 | |
| 7 | G | K | -0.8745 | |
| 1 | F | L | 3.0694 | |
| 2 | F | L | 2.5670 | |
| 3 | K | L | 1.2558 | |
| 4 | G | L | -0.0121 | |
| 5 | H | L | -1.3781 | |
| 6 | G | L | -1.4892 | |
| 7 | G | L | -1.1026 | |
| 1 | F | M | 2.4027 | |
| 2 | F | M | 2.0461 | |
| 3 | K | M | -0.0863 | |
| 4 | G | M | 0.0000 | |
| 5 | H | M | -2.1604 | |
| 6 | G | M | -1.8971 | |
| 7 | G | M | -1.4393 | |
| 1 | F | N | 2.3925 | |
| 2 | F | N | 1.1855 | |
| 3 | K | N | -0.6564 | |
| 4 | G | N | -1.1279 | |
| 5 | H | N | -2.5212 | |
| 6 | G | N | -1.8984 | |
| 7 | G | N | -1.4798 | |
| 1 | F | O | 2.8735 | |
| 2 | F | O | 2.9134 | |
| 3 | K | O | 0.9872 | |
| 4 | G | O | -0.2976 | |
| 5 | H | O | -1.4496 | |
| 6 | G | O | -1.7422 | |
| 7 | G | O | -1.5165 | |
| 1 | F | P | 0.0000 | |
| 2 | F | P | 2.4350 | |
| 3 | K | P | 0.4223 | |
| 4 | G | P | -0.6337 | |
| 5 | H | P | -1.5372 | |
| 6 | G | P | -1.6265 | |
| 7 | G | P | -1.3007 | |
| 1 | F | Q | 3.1425 | |
| 2 | F | Q | 2.4367 | |
| 3 | K | Q | 0.2320 | |
| 4 | G | Q | -0.8751 | |
| 5 | H | Q | -1.7034 | |
| 6 | G | Q | -1.6670 | |
| 7 | G | Q | -1.3771 | |
| 1 | F | R | 2.4362 | |
| 2 | F | R | 2.3835 | |
| 3 | K | R | -0.3897 | |
| 4 | G | R | -1.1745 | |
| 5 | H | R | -2.3350 | |
| 6 | G | R | -2.0415 | |
| 7 | G | R | -1.5040 | |
| 1 | F | S | 0.0000 | |
| 2 | F | S | 1.7839 | |
| 3 | K | S | 0.1383 | |
| 4 | G | S | -1.5361 | |
| 5 | H | S | -2.2662 | |
| 6 | G | S | -2.1568 | |
| 7 | G | S | -1.4688 | |
| 1 | F | T | 1.9823 | |
| 2 | F | T | 2.3437 | |
| 3 | K | T | 0.1428 | |
| 4 | G | T | -1.0875 | |
| 5 | H | T | -1.6945 | |
| 6 | G | T | -1.7701 | |
| 7 | G | T | -1.2442 |