| Chain sequence(s) |
H: EVQLLESGGGLVQPGGSLRLSCAMSGHFFNLYIMAWFRQAPGKEREFVAGVSTSGRTSLYADSVKGRFTISRDNSKTTGYLQMNSLKSEDTAVYYCAARSSASELWVPSGDEYYAWWGQGTTVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.3203 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.3349 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.8819 | |
| 6 | E | H | 0.0033 | |
| 7 | S | H | -0.4580 | |
| 8 | G | H | -1.0924 | |
| 9 | G | H | -0.4954 | |
| 10 | G | H | 0.2254 | |
| 11 | L | H | 1.1231 | |
| 12 | V | H | 0.0000 | |
| 13 | Q | H | -1.4729 | |
| 14 | P | H | -1.7377 | |
| 15 | G | H | -1.4745 | |
| 16 | G | H | -0.9861 | |
| 17 | S | H | -1.2755 | |
| 18 | L | H | -0.9329 | |
| 19 | R | H | -2.1229 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.4570 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.0865 | |
| 24 | M | H | 0.0000 | |
| 25 | S | H | -0.7830 | |
| 26 | G | H | -1.2938 | |
| 27 | H | H | -0.7030 | |
| 28 | F | H | 0.8795 | |
| 29 | F | H | 0.0000 | |
| 30 | N | H | -0.6058 | |
| 31 | L | H | 0.7278 | |
| 32 | Y | H | 0.5017 | |
| 33 | I | H | 0.0000 | |
| 34 | M | H | 0.0000 | |
| 35 | A | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | F | H | 0.0000 | |
| 38 | R | H | -1.5678 | |
| 39 | Q | H | -2.2192 | |
| 40 | A | H | -1.9612 | |
| 41 | P | H | -1.4188 | |
| 42 | G | H | -1.9738 | |
| 43 | K | H | -3.4724 | |
| 44 | E | H | -3.7470 | |
| 45 | R | H | -3.2623 | |
| 46 | E | H | -3.2187 | |
| 47 | F | H | 0.0000 | |
| 48 | V | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | G | H | 0.0000 | |
| 51 | V | H | 0.0000 | |
| 52 | S | H | 0.0000 | |
| 53 | T | H | -0.4510 | |
| 54 | S | H | -0.9292 | |
| 55 | G | H | -1.6965 | |
| 56 | R | H | -1.9433 | |
| 57 | T | H | -0.6284 | |
| 58 | S | H | -0.2876 | |
| 59 | L | H | 0.1396 | |
| 60 | Y | H | -0.7282 | |
| 61 | A | H | -1.5407 | |
| 62 | D | H | -2.4942 | |
| 63 | S | H | -1.8429 | |
| 64 | V | H | 0.0000 | |
| 65 | K | H | -2.6115 | |
| 66 | G | H | -1.8029 | |
| 67 | R | H | -1.5526 | |
| 68 | F | H | 0.0000 | |
| 69 | T | H | -0.8133 | |
| 70 | I | H | 0.0000 | |
| 71 | S | H | -0.7904 | |
| 72 | R | H | -1.4615 | |
| 73 | D | H | -1.9423 | |
| 74 | N | H | -2.1642 | |
| 75 | S | H | -1.9410 | |
| 76 | K | H | -2.3707 | |
| 77 | T | H | -1.6925 | |
| 78 | T | H | 0.0000 | |
| 79 | G | H | 0.0000 | |
| 80 | Y | H | -0.6364 | |
| 81 | L | H | 0.0000 | |
| 82 | Q | H | -1.2224 | |
| 83 | M | H | 0.0000 | |
| 84 | N | H | -1.4091 | |
| 85 | S | H | -1.2718 | |
| 86 | L | H | 0.0000 | |
| 87 | K | H | -2.4224 | |
| 88 | S | H | -1.9755 | |
| 89 | E | H | -2.2465 | |
| 90 | D | H | 0.0000 | |
| 91 | T | H | -0.7497 | |
| 92 | A | H | 0.0000 | |
| 93 | V | H | -0.0257 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | -0.2844 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | A | H | 0.0000 | |
| 99 | R | H | -0.0332 | |
| 100 | S | H | 0.2088 | |
| 101 | S | H | 0.2876 | |
| 102 | A | H | 0.1684 | |
| 103 | S | H | -0.0375 | |
| 104 | E | H | 0.3547 | |
| 105 | L | H | 1.4374 | |
| 106 | W | H | 1.4215 | |
| 107 | V | H | 0.0000 | |
| 108 | P | H | 0.0000 | |
| 109 | S | H | -0.5982 | |
| 110 | G | H | -1.3199 | |
| 111 | D | H | -2.0294 | |
| 112 | E | H | -1.9280 | |
| 113 | Y | H | -0.4233 | |
| 114 | Y | H | 0.0000 | |
| 115 | A | H | -0.0621 | |
| 116 | W | H | 0.1271 | |
| 117 | W | H | 0.0312 | |
| 118 | G | H | -0.2627 | |
| 119 | Q | H | -0.9596 | |
| 120 | G | H | -0.4114 | |
| 121 | T | H | -0.2657 | |
| 122 | T | H | 0.0747 | |
| 123 | V | H | 0.0000 | |
| 124 | T | H | -0.0913 | |
| 125 | V | H | 0.0000 | |
| 126 | S | H | -0.5652 | |
| 127 | S | H | -0.9263 |