Project name: query_structure

Status: done

Started: 2026-03-16 20:41:12
Settings
Chain sequence(s) A: QCTGGADCTSCTGACTGCGNCPNAVTCTNSQHCVKANTCTGSTDCNTAQTCTNSKDCFEANTCTDSTNCYKATACTNSSGCP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:24)
Show buried residues

Minimal score value
-2.4527
Maximal score value
0.4623
Average score
-0.8007
Total score value
-65.6557

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 Q A -1.6237
3 C A -1.0804
4 T A -0.8864
5 G A -1.2206
6 G A -1.3154
7 A A -1.3565
8 D A -2.4527
9 C A 0.0000
10 T A -1.1179
11 S A -0.9251
12 C A 0.0000
13 T A -0.3287
14 G A 0.0021
15 A A 0.1212
16 C A 0.0000
17 T A -0.9273
18 G A -1.1915
19 C A 0.0000
20 G A -1.6435
21 N A -1.6510
22 C A 0.0000
23 P A -1.0175
24 N A -0.7136
25 A A 0.0000
26 V A 0.4623
27 T A -0.0256
28 C A 0.0000
29 T A -1.0529
30 N A -1.8479
31 S A 0.0000
32 Q A -1.9620
33 H A -1.7194
34 C A 0.0000
35 V A -0.8409
36 K A -1.6457
37 A A 0.0000
38 N A -1.2537
39 T A -0.6150
40 C A 0.0000
41 T A -1.0620
42 G A -1.6112
43 S A 0.0000
44 T A -1.6000
45 D A -1.2912
46 C A 0.0000
47 N A -1.2550
48 T A -1.0409
49 A A 0.0000
50 Q A -1.5464
51 T A -0.8851
52 C A 0.0000
53 T A -1.1389
54 N A -2.2607
55 S A 0.0000
56 K A -2.0601
57 D A -1.0827
58 C A 0.0000
59 F A -0.5429
60 E A -1.4415
61 A A 0.0000
62 N A -1.4285
63 T A -0.8689
64 C A 0.0000
65 T A -1.1544
66 D A -2.0870
67 S A 0.0000
68 T A -1.2610
69 N A -0.9245
70 C A 0.0000
71 Y A -0.0899
72 K A -1.6714
73 A A 0.0000
74 T A -0.5426
75 A A -0.3182
76 C A -0.4699
77 T A -0.8012
78 N A -1.7490
79 S A -1.4404
80 S A -0.8898
81 G A -0.4870
82 C A -0.4053
83 P A -0.4188
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Laboratory of Theory of Biopolymers 2018