| Chain sequence(s) |
A: QCTGGADCTSCTGACTGCGNCPNAVTCTNSQHCVKANTCTGSTDCNTAQTCTNSKDCFEANTCTDSTNCYKATACTNSSGCP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:24)
[INFO] Main: Simulation completed successfully. (00:00:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | Q | A | -1.6237 | |
| 3 | C | A | -1.0804 | |
| 4 | T | A | -0.8864 | |
| 5 | G | A | -1.2206 | |
| 6 | G | A | -1.3154 | |
| 7 | A | A | -1.3565 | |
| 8 | D | A | -2.4527 | |
| 9 | C | A | 0.0000 | |
| 10 | T | A | -1.1179 | |
| 11 | S | A | -0.9251 | |
| 12 | C | A | 0.0000 | |
| 13 | T | A | -0.3287 | |
| 14 | G | A | 0.0021 | |
| 15 | A | A | 0.1212 | |
| 16 | C | A | 0.0000 | |
| 17 | T | A | -0.9273 | |
| 18 | G | A | -1.1915 | |
| 19 | C | A | 0.0000 | |
| 20 | G | A | -1.6435 | |
| 21 | N | A | -1.6510 | |
| 22 | C | A | 0.0000 | |
| 23 | P | A | -1.0175 | |
| 24 | N | A | -0.7136 | |
| 25 | A | A | 0.0000 | |
| 26 | V | A | 0.4623 | |
| 27 | T | A | -0.0256 | |
| 28 | C | A | 0.0000 | |
| 29 | T | A | -1.0529 | |
| 30 | N | A | -1.8479 | |
| 31 | S | A | 0.0000 | |
| 32 | Q | A | -1.9620 | |
| 33 | H | A | -1.7194 | |
| 34 | C | A | 0.0000 | |
| 35 | V | A | -0.8409 | |
| 36 | K | A | -1.6457 | |
| 37 | A | A | 0.0000 | |
| 38 | N | A | -1.2537 | |
| 39 | T | A | -0.6150 | |
| 40 | C | A | 0.0000 | |
| 41 | T | A | -1.0620 | |
| 42 | G | A | -1.6112 | |
| 43 | S | A | 0.0000 | |
| 44 | T | A | -1.6000 | |
| 45 | D | A | -1.2912 | |
| 46 | C | A | 0.0000 | |
| 47 | N | A | -1.2550 | |
| 48 | T | A | -1.0409 | |
| 49 | A | A | 0.0000 | |
| 50 | Q | A | -1.5464 | |
| 51 | T | A | -0.8851 | |
| 52 | C | A | 0.0000 | |
| 53 | T | A | -1.1389 | |
| 54 | N | A | -2.2607 | |
| 55 | S | A | 0.0000 | |
| 56 | K | A | -2.0601 | |
| 57 | D | A | -1.0827 | |
| 58 | C | A | 0.0000 | |
| 59 | F | A | -0.5429 | |
| 60 | E | A | -1.4415 | |
| 61 | A | A | 0.0000 | |
| 62 | N | A | -1.4285 | |
| 63 | T | A | -0.8689 | |
| 64 | C | A | 0.0000 | |
| 65 | T | A | -1.1544 | |
| 66 | D | A | -2.0870 | |
| 67 | S | A | 0.0000 | |
| 68 | T | A | -1.2610 | |
| 69 | N | A | -0.9245 | |
| 70 | C | A | 0.0000 | |
| 71 | Y | A | -0.0899 | |
| 72 | K | A | -1.6714 | |
| 73 | A | A | 0.0000 | |
| 74 | T | A | -0.5426 | |
| 75 | A | A | -0.3182 | |
| 76 | C | A | -0.4699 | |
| 77 | T | A | -0.8012 | |
| 78 | N | A | -1.7490 | |
| 79 | S | A | -1.4404 | |
| 80 | S | A | -0.8898 | |
| 81 | G | A | -0.4870 | |
| 82 | C | A | -0.4053 | |
| 83 | P | A | -0.4188 |