Project name: query_structure

Status: done

Started: 2026-03-16 23:24:01
Settings
Chain sequence(s) A: GIPCGESCVFIPCLTTVAGCSCKNKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:38)
Show buried residues

Minimal score value
-2.1453
Maximal score value
3.1339
Average score
0.2421
Total score value
7.2615

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5681
2 I A 0.9727
3 P A 0.1172
4 C A 0.1929
5 G A -0.3336
6 E A 0.1529
7 S A 0.5866
8 C A 1.2829
9 V A 2.5025
10 F A 3.1339
11 I A 2.5842
12 P A 1.5056
13 C A 0.0000
14 L A 1.9864
15 T A 1.0943
16 T A 1.0865
17 V A 2.0088
18 A A 0.7969
19 G A -0.1216
20 C A 0.0000
21 S A -0.7660
22 C A -0.5839
23 K A -2.1453
24 N A -2.0997
25 K A -1.2737
26 V A -0.8037
27 C A 0.0000
28 Y A -0.8604
29 R A -1.4943
30 N A -1.6925
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Laboratory of Theory of Biopolymers 2018