| Chain sequence(s) |
A: DVQLQESGGGLVQPGGSLRLSCAASGFLFSDTYMTWARQAPGKGLEWLGGISKDGSGTLYEDSVEGRFTISRDNAKNTLYLQMNSLKSEDTALYYCSTGALLPTRPQGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:47)
[INFO] Main: Simulation completed successfully. (00:01:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.7707 | |
| 2 | V | A | -0.5768 | |
| 3 | Q | A | -1.5212 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.4441 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -1.1849 | |
| 8 | G | A | -1.2075 | |
| 9 | G | A | -0.8463 | |
| 10 | G | A | -0.0508 | |
| 11 | L | A | 1.0440 | |
| 12 | V | A | -0.0232 | |
| 13 | Q | A | -1.3432 | |
| 14 | P | A | -1.6983 | |
| 15 | G | A | -1.5532 | |
| 16 | G | A | -1.0920 | |
| 17 | S | A | -1.5479 | |
| 18 | L | A | -1.1388 | |
| 19 | R | A | -2.3393 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.8360 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.9282 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.5782 | |
| 26 | G | A | -0.5680 | |
| 27 | F | A | 0.3126 | |
| 28 | L | A | 0.8053 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -1.8365 | |
| 31 | D | A | -2.1302 | |
| 32 | T | A | -1.1718 | |
| 33 | Y | A | -1.0498 | |
| 34 | M | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | A | A | -0.3295 | |
| 38 | R | A | -0.9204 | |
| 39 | Q | A | -1.4396 | |
| 40 | A | A | 0.0000 | |
| 41 | P | A | -1.1940 | |
| 42 | G | A | -1.5666 | |
| 43 | K | A | -2.4592 | |
| 44 | G | A | -1.6578 | |
| 45 | L | A | -0.9790 | |
| 46 | E | A | -1.0891 | |
| 47 | W | A | 0.0967 | |
| 48 | L | A | 0.0000 | |
| 49 | G | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | -1.4849 | |
| 53 | K | A | -2.8493 | |
| 54 | D | A | -3.1154 | |
| 55 | G | A | -1.8567 | |
| 56 | S | A | -1.2182 | |
| 57 | G | A | -0.5506 | |
| 58 | T | A | 0.4737 | |
| 59 | L | A | 0.7311 | |
| 60 | Y | A | -0.6171 | |
| 61 | E | A | -1.9403 | |
| 62 | D | A | -2.7729 | |
| 63 | S | A | -1.9231 | |
| 64 | V | A | 0.0000 | |
| 65 | E | A | -2.8020 | |
| 66 | G | A | -2.0314 | |
| 67 | R | A | -1.7082 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.9652 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.4650 | |
| 72 | R | A | -1.3721 | |
| 73 | D | A | -1.6917 | |
| 74 | N | A | -2.1287 | |
| 75 | A | A | -1.3949 | |
| 76 | K | A | -2.2854 | |
| 77 | N | A | -1.4889 | |
| 78 | T | A | -1.2541 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | -0.6212 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.6741 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -2.1951 | |
| 85 | S | A | -1.5610 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.4010 | |
| 88 | S | A | -1.9578 | |
| 89 | E | A | -2.3349 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.9755 | |
| 92 | A | A | 0.0000 | |
| 93 | L | A | -0.5136 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.8263 | |
| 96 | C | A | 0.0000 | |
| 97 | S | A | -0.5240 | |
| 98 | T | A | 0.1874 | |
| 99 | G | A | 0.3032 | |
| 100 | A | A | 1.0880 | |
| 101 | L | A | 2.2357 | |
| 102 | L | A | 1.8790 | |
| 103 | P | A | 0.2599 | |
| 104 | T | A | -0.4315 | |
| 105 | R | A | -1.8659 | |
| 106 | P | A | -1.5608 | |
| 107 | Q | A | -1.5457 | |
| 108 | G | A | -1.5242 | |
| 109 | Q | A | -1.7295 | |
| 110 | G | A | -1.1840 | |
| 111 | T | A | 0.0000 | |
| 112 | Q | A | -1.2288 | |
| 113 | V | A | 0.0000 | |
| 114 | T | A | -0.3062 | |
| 115 | V | A | 0.0000 | |
| 116 | S | A | -0.6782 | |
| 117 | S | A | -0.5606 |