Project name: c5b4010b2d50f80

Status: done

Started: 2026-01-28 10:56:46
Settings
Chain sequence(s) L: KDFGAGPGTGWESKD
input PDB
Selected Chain(s) L
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:03)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:03)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with L chain(s) selected             (00:00:03)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:03)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:03)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:24)
Show buried residues

Minimal score value
-2.0897
Maximal score value
1.541
Average score
-0.6833
Total score value
-10.2499

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 K L -2.0194
1 D L -1.7510
2 F L 1.5410
3 G L -0.1023
4 A L -0.1134
5 G L -0.5045
6 P L -0.4245
7 G L -0.5233
8 T L -0.2366
9 G L -0.2616
10 W L 0.7770
11 E L -1.6470
12 S L -0.8413
13 K L -2.0533
14 D L -2.0897
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Laboratory of Theory of Biopolymers 2018