| Chain sequence(s) |
A: QVQLVESGGGSVQAGGSLRLSATASGGSEYSYSTFSLGWFRQAPGQEREAVAAIASMGGLTYYADSVKGRFTISRDNAKNTVTLQMNNLKPEDTAIYYVAAVRGYFMRLPSSHNFRYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.6545 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.5463 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | -0.0276 | |
| 6 | E | A | -0.5915 | |
| 7 | S | A | -0.9635 | |
| 8 | G | A | -1.3250 | |
| 9 | G | A | -1.2337 | |
| 10 | G | A | -0.9596 | |
| 11 | S | A | -0.7222 | |
| 12 | V | A | -0.7914 | |
| 13 | Q | A | -1.7623 | |
| 14 | A | A | -1.9560 | |
| 15 | G | A | -1.8934 | |
| 16 | G | A | -1.4859 | |
| 17 | S | A | -1.5436 | |
| 18 | L | A | -1.2931 | |
| 19 | R | A | -2.1615 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.7025 | |
| 22 | A | A | 0.0000 | |
| 23 | T | A | -0.6904 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.9037 | |
| 26 | G | A | -1.6630 | |
| 27 | G | A | -1.5373 | |
| 28 | S | A | -1.3679 | |
| 29 | E | A | -2.0381 | |
| 30 | Y | A | -1.4599 | |
| 31 | S | A | -1.1040 | |
| 32 | Y | A | 0.0000 | |
| 33 | S | A | -0.1156 | |
| 34 | T | A | -0.3875 | |
| 35 | F | A | 0.0000 | |
| 36 | S | A | 0.0000 | |
| 37 | L | A | 0.0000 | |
| 38 | G | A | 0.0000 | |
| 39 | W | A | 0.0000 | |
| 40 | F | A | 0.0000 | |
| 41 | R | A | -1.2761 | |
| 42 | Q | A | -1.9206 | |
| 43 | A | A | -1.7821 | |
| 44 | P | A | -1.2384 | |
| 45 | G | A | -1.7280 | |
| 46 | Q | A | -2.8441 | |
| 47 | E | A | -3.3385 | |
| 48 | R | A | -2.7308 | |
| 49 | E | A | -1.9099 | |
| 50 | A | A | -0.7594 | |
| 51 | V | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | I | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | S | A | 0.0000 | |
| 57 | M | A | 0.9372 | |
| 58 | G | A | 0.3479 | |
| 59 | G | A | 0.5948 | |
| 60 | L | A | 1.7737 | |
| 61 | T | A | 0.7631 | |
| 62 | Y | A | 0.3612 | |
| 63 | Y | A | -0.7311 | |
| 64 | A | A | 0.0000 | |
| 65 | D | A | -2.4016 | |
| 66 | S | A | -1.7802 | |
| 67 | V | A | 0.0000 | |
| 68 | K | A | -2.5525 | |
| 69 | G | A | -1.9035 | |
| 70 | R | A | -1.7795 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.8065 | |
| 73 | I | A | 0.0000 | |
| 74 | S | A | -0.5764 | |
| 75 | R | A | -0.9931 | |
| 76 | D | A | -1.6293 | |
| 77 | N | A | -1.4891 | |
| 78 | A | A | -1.3838 | |
| 79 | K | A | -2.2336 | |
| 80 | N | A | -1.5130 | |
| 81 | T | A | -1.1310 | |
| 82 | V | A | 0.0000 | |
| 83 | T | A | -0.8096 | |
| 84 | L | A | 0.0000 | |
| 85 | Q | A | -1.1562 | |
| 86 | M | A | 0.0000 | |
| 87 | N | A | -2.0572 | |
| 88 | N | A | -2.4192 | |
| 89 | L | A | 0.0000 | |
| 90 | K | A | -2.8007 | |
| 91 | P | A | -1.9779 | |
| 92 | E | A | -2.3766 | |
| 93 | D | A | 0.0000 | |
| 94 | T | A | -1.1583 | |
| 95 | A | A | 0.0000 | |
| 96 | I | A | -0.4621 | |
| 97 | Y | A | 0.0000 | |
| 98 | Y | A | -0.4263 | |
| 99 | V | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | A | A | 0.0000 | |
| 102 | V | A | 0.0000 | |
| 103 | R | A | -1.8116 | |
| 104 | G | A | 0.1707 | |
| 105 | Y | A | 1.6677 | |
| 106 | F | A | 1.3815 | |
| 107 | M | A | 0.4942 | |
| 108 | R | A | -1.2912 | |
| 109 | L | A | -0.8107 | |
| 110 | P | A | -0.8927 | |
| 111 | S | A | -1.2924 | |
| 112 | S | A | -1.6044 | |
| 113 | H | A | -1.8394 | |
| 114 | N | A | -2.1595 | |
| 115 | F | A | 0.0000 | |
| 116 | R | A | -2.3964 | |
| 117 | Y | A | -1.2946 | |
| 118 | W | A | -0.4841 | |
| 119 | G | A | -0.5521 | |
| 120 | Q | A | -1.1532 | |
| 121 | G | A | -0.7620 | |
| 122 | T | A | 0.0000 | |
| 123 | Q | A | -1.3003 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | -0.9726 | |
| 126 | V | A | 0.0000 | |
| 127 | S | A | -1.1806 | |
| 128 | S | A | -0.8836 |