Project name: query_structure

Status: done

Started: 2026-03-17 00:54:52
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Chain sequence(s) A: QVQLVESGGGSVQAGGSLRLSATASGGSEYSYSTFSLGWFRQAPGQEREAVAAIASMGGLTYYADSVKGRFTISRDNAKNTVTLQMNNLKPEDTAIYYVAAVRGYFMRLPSSHNFRYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:05)
Show buried residues

Minimal score value
-3.3385
Maximal score value
1.7737
Average score
-0.8293
Total score value
-106.1466

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.6545
2 V A 0.0000
3 Q A -1.5463
4 L A 0.0000
5 V A -0.0276
6 E A -0.5915
7 S A -0.9635
8 G A -1.3250
9 G A -1.2337
10 G A -0.9596
11 S A -0.7222
12 V A -0.7914
13 Q A -1.7623
14 A A -1.9560
15 G A -1.8934
16 G A -1.4859
17 S A -1.5436
18 L A -1.2931
19 R A -2.1615
20 L A 0.0000
21 S A -0.7025
22 A A 0.0000
23 T A -0.6904
24 A A 0.0000
25 S A -0.9037
26 G A -1.6630
27 G A -1.5373
28 S A -1.3679
29 E A -2.0381
30 Y A -1.4599
31 S A -1.1040
32 Y A 0.0000
33 S A -0.1156
34 T A -0.3875
35 F A 0.0000
36 S A 0.0000
37 L A 0.0000
38 G A 0.0000
39 W A 0.0000
40 F A 0.0000
41 R A -1.2761
42 Q A -1.9206
43 A A -1.7821
44 P A -1.2384
45 G A -1.7280
46 Q A -2.8441
47 E A -3.3385
48 R A -2.7308
49 E A -1.9099
50 A A -0.7594
51 V A 0.0000
52 A A 0.0000
53 A A 0.0000
54 I A 0.0000
55 A A 0.0000
56 S A 0.0000
57 M A 0.9372
58 G A 0.3479
59 G A 0.5948
60 L A 1.7737
61 T A 0.7631
62 Y A 0.3612
63 Y A -0.7311
64 A A 0.0000
65 D A -2.4016
66 S A -1.7802
67 V A 0.0000
68 K A -2.5525
69 G A -1.9035
70 R A -1.7795
71 F A 0.0000
72 T A -0.8065
73 I A 0.0000
74 S A -0.5764
75 R A -0.9931
76 D A -1.6293
77 N A -1.4891
78 A A -1.3838
79 K A -2.2336
80 N A -1.5130
81 T A -1.1310
82 V A 0.0000
83 T A -0.8096
84 L A 0.0000
85 Q A -1.1562
86 M A 0.0000
87 N A -2.0572
88 N A -2.4192
89 L A 0.0000
90 K A -2.8007
91 P A -1.9779
92 E A -2.3766
93 D A 0.0000
94 T A -1.1583
95 A A 0.0000
96 I A -0.4621
97 Y A 0.0000
98 Y A -0.4263
99 V A 0.0000
100 A A 0.0000
101 A A 0.0000
102 V A 0.0000
103 R A -1.8116
104 G A 0.1707
105 Y A 1.6677
106 F A 1.3815
107 M A 0.4942
108 R A -1.2912
109 L A -0.8107
110 P A -0.8927
111 S A -1.2924
112 S A -1.6044
113 H A -1.8394
114 N A -2.1595
115 F A 0.0000
116 R A -2.3964
117 Y A -1.2946
118 W A -0.4841
119 G A -0.5521
120 Q A -1.1532
121 G A -0.7620
122 T A 0.0000
123 Q A -1.3003
124 V A 0.0000
125 T A -0.9726
126 V A 0.0000
127 S A -1.1806
128 S A -0.8836
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Laboratory of Theory of Biopolymers 2018