Project name: c5edb98d7932dce

Status: done

Started: 2026-06-17 19:53:08
Settings
Chain sequence(s) A: VLRGGSGGSGGSVLKGGSGGSGGSVLRGGSGGSGGSVLKGGSGGSGGSVLRGGSGGSGGSVLKGGSGGSGGSVLR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:39)
Show buried residues

Minimal score value
-2.8438
Maximal score value
1.4842
Average score
-0.7069
Total score value
-53.0169

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.4842
2 L A 1.2061
3 R A -1.5144
4 G A -1.1937
5 G A -0.7796
6 S A -0.6577
7 G A 0.0000
8 G A -0.8385
9 S A -1.0782
10 G A -1.1180
11 G A -0.5944
12 S A 0.0802
13 V A 0.0000
14 L A -0.0219
15 K A -2.2196
16 G A -1.6648
17 G A -1.0952
18 S A -0.7022
19 G A 0.0000
20 G A -1.0023
21 S A -1.1214
22 G A -1.2836
23 G A 0.0000
24 S A -0.4790
25 V A 0.0000
26 L A -0.4937
27 R A -2.8438
28 G A -1.8563
29 G A -1.2955
30 S A -0.6672
31 G A 0.0000
32 G A -0.9347
33 S A -1.0497
34 G A -1.2698
35 G A 0.0000
36 S A -0.3187
37 V A 0.0000
38 L A -0.2473
39 K A -2.3909
40 G A -1.6978
41 G A -1.1643
42 S A -0.6491
43 G A 0.0000
44 G A -0.8984
45 S A -1.0837
46 G A -1.3011
47 G A 0.0000
48 S A -0.2608
49 V A 0.0000
50 L A 0.2420
51 R A -2.2545
52 G A -1.5146
53 G A -1.1268
54 S A -0.6812
55 G A 0.0000
56 G A -1.0232
57 S A -1.0960
58 G A -1.3437
59 G A 0.0000
60 S A -0.1593
61 V A 0.0000
62 L A 0.3508
63 K A -1.6846
64 G A -1.3036
65 G A -1.0204
66 S A -0.5044
67 G A -0.5322
68 G A -0.9581
69 S A -0.9089
70 G A -1.1085
71 G A -1.0183
72 S A -0.1704
73 V A 0.4805
74 L A 0.8144
75 R A -1.4791
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Laboratory of Theory of Biopolymers 2018