| Chain sequence(s) |
A: TTFKIVNRCRHTVWPGILTGADRPLLNPTGFTLTPGKSRTLRVPVAWSGRLWGRTDCSTDSTGKLTCLTADCGSGKVQCEGRGAEPPATLAEFTLNGDQGLDFYDVSLVDGYNLPMLVIPRDGKSGACSSTGCLVDLNGACPTALRVARAGSSRSVVACKSACEAFGDPRYCCSEAYNTPETCPPTEYSSYFKHVCPRSYSYAYDDKTSTFTCVGADYMIIFCPLPH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | T | A | -0.3220 | |
| 3 | T | A | -0.8453 | |
| 4 | F | A | 0.0000 | |
| 5 | K | A | -1.0377 | |
| 6 | I | A | 0.0000 | |
| 7 | V | A | 0.0000 | |
| 8 | N | A | 0.0000 | |
| 9 | R | A | -2.5722 | |
| 10 | C | A | 0.0000 | |
| 11 | R | A | -2.6705 | |
| 12 | H | A | -2.0765 | |
| 13 | T | A | -1.4328 | |
| 14 | V | A | 0.0000 | |
| 15 | W | A | -0.0411 | |
| 16 | P | A | 0.0000 | |
| 17 | G | A | 0.0000 | |
| 18 | I | A | 0.0000 | |
| 19 | L | A | -0.4882 | |
| 20 | T | A | 0.0000 | |
| 21 | G | A | -0.6972 | |
| 22 | A | A | -1.0620 | |
| 23 | D | A | -2.1741 | |
| 24 | R | A | -1.7229 | |
| 25 | P | A | -0.6087 | |
| 26 | L | A | 0.3020 | |
| 27 | L | A | 0.0000 | |
| 28 | N | A | -1.3365 | |
| 29 | P | A | -0.7689 | |
| 30 | T | A | 0.0000 | |
| 31 | G | A | 0.0000 | |
| 32 | F | A | 0.0000 | |
| 33 | T | A | -0.2177 | |
| 34 | L | A | 0.0000 | |
| 35 | T | A | -1.3602 | |
| 36 | P | A | -2.1818 | |
| 37 | G | A | -2.3845 | |
| 38 | K | A | -2.6336 | |
| 39 | S | A | -2.0135 | |
| 40 | R | A | -1.7820 | |
| 41 | T | A | -1.2302 | |
| 42 | L | A | -1.4379 | |
| 43 | R | A | -1.8811 | |
| 44 | V | A | 0.0000 | |
| 45 | P | A | 0.1387 | |
| 46 | V | A | 1.0417 | |
| 47 | A | A | 0.2121 | |
| 48 | W | A | 0.0000 | |
| 49 | S | A | -0.1830 | |
| 50 | G | A | -0.3475 | |
| 51 | R | A | -0.6267 | |
| 52 | L | A | 0.0000 | |
| 53 | W | A | 0.0000 | |
| 54 | G | A | 0.0000 | |
| 55 | R | A | 0.0000 | |
| 56 | T | A | 0.0000 | |
| 57 | D | A | -1.6466 | |
| 58 | C | A | -0.7813 | |
| 59 | S | A | -1.2416 | |
| 60 | T | A | -1.6801 | |
| 61 | D | A | -2.4033 | |
| 62 | S | A | -1.4683 | |
| 63 | T | A | -1.4331 | |
| 64 | G | A | -2.0840 | |
| 65 | K | A | -2.7247 | |
| 66 | L | A | -1.7809 | |
| 67 | T | A | -1.1947 | |
| 68 | C | A | -0.6363 | |
| 69 | L | A | -0.4775 | |
| 70 | T | A | 0.0000 | |
| 71 | A | A | 0.0000 | |
| 72 | D | A | -1.2461 | |
| 73 | C | A | 0.0000 | |
| 74 | G | A | -1.7675 | |
| 75 | S | A | -1.7320 | |
| 76 | G | A | -1.9158 | |
| 77 | K | A | -2.3387 | |
| 78 | V | A | -0.9435 | |
| 79 | Q | A | -1.6251 | |
| 80 | C | A | 0.0000 | |
| 81 | E | A | -2.2575 | |
| 82 | G | A | -1.3220 | |
| 83 | R | A | -2.2757 | |
| 84 | G | A | -1.5543 | |
| 85 | A | A | -1.4786 | |
| 86 | E | A | -2.1947 | |
| 87 | P | A | -1.3441 | |
| 88 | P | A | 0.0000 | |
| 89 | A | A | 0.0000 | |
| 90 | T | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | E | A | -0.6658 | |
| 94 | F | A | 0.0000 | |
| 95 | T | A | -0.3670 | |
| 96 | L | A | 0.0000 | |
| 97 | N | A | -1.3782 | |
| 98 | G | A | -1.5439 | |
| 99 | D | A | -2.6169 | |
| 100 | Q | A | -2.2661 | |
| 101 | G | A | -1.4941 | |
| 102 | L | A | -1.0714 | |
| 103 | D | A | 0.0000 | |
| 104 | F | A | 0.0432 | |
| 105 | Y | A | 0.0000 | |
| 106 | D | A | -0.4286 | |
| 107 | V | A | 0.0000 | |
| 108 | S | A | 0.0000 | |
| 109 | L | A | 0.0000 | |
| 110 | V | A | 0.3224 | |
| 111 | D | A | -0.5944 | |
| 112 | G | A | 0.0000 | |
| 113 | Y | A | 0.0000 | |
| 114 | N | A | 0.0000 | |
| 115 | L | A | 0.0000 | |
| 116 | P | A | 0.0000 | |
| 117 | M | A | 0.0000 | |
| 118 | L | A | 0.6994 | |
| 119 | V | A | 0.0000 | |
| 120 | I | A | 0.4812 | |
| 121 | P | A | -0.5423 | |
| 122 | R | A | -1.8954 | |
| 123 | D | A | -2.7949 | |
| 124 | G | A | -2.2284 | |
| 125 | K | A | -2.3465 | |
| 126 | S | A | -1.1224 | |
| 127 | G | A | -0.3186 | |
| 128 | A | A | -0.2224 | |
| 129 | C | A | -0.4240 | |
| 130 | S | A | -0.0947 | |
| 131 | S | A | 0.0307 | |
| 132 | T | A | 0.0000 | |
| 133 | G | A | 0.0000 | |
| 134 | C | A | 0.0000 | |
| 135 | L | A | 0.9801 | |
| 136 | V | A | 0.5955 | |
| 137 | D | A | -1.1306 | |
| 138 | L | A | 0.0000 | |
| 139 | N | A | -0.7818 | |
| 140 | G | A | -0.9222 | |
| 141 | A | A | -0.4412 | |
| 142 | C | A | 0.0000 | |
| 143 | P | A | -0.3862 | |
| 144 | T | A | -0.3270 | |
| 145 | A | A | -0.1633 | |
| 146 | L | A | 0.0000 | |
| 147 | R | A | -1.1793 | |
| 148 | V | A | -0.7190 | |
| 149 | A | A | -1.4410 | |
| 150 | R | A | -2.4372 | |
| 151 | A | A | -1.9223 | |
| 152 | G | A | -1.7571 | |
| 153 | S | A | -1.3993 | |
| 154 | S | A | -1.6726 | |
| 155 | R | A | -2.7319 | |
| 156 | S | A | -1.7811 | |
| 157 | V | A | -0.9262 | |
| 158 | V | A | -0.6897 | |
| 159 | A | A | 0.0000 | |
| 160 | C | A | 0.0000 | |
| 161 | K | A | -0.8634 | |
| 162 | S | A | 0.0000 | |
| 163 | A | A | 0.0000 | |
| 164 | C | A | -0.4041 | |
| 165 | E | A | -0.8317 | |
| 166 | A | A | -0.2363 | |
| 167 | F | A | 0.3397 | |
| 168 | G | A | -0.6455 | |
| 169 | D | A | -1.3686 | |
| 170 | P | A | -1.6348 | |
| 171 | R | A | -2.0265 | |
| 172 | Y | A | -0.5544 | |
| 173 | C | A | -0.7890 | |
| 174 | C | A | 0.0000 | |
| 175 | S | A | -1.7950 | |
| 176 | E | A | -2.4666 | |
| 177 | A | A | -1.3669 | |
| 178 | Y | A | -1.8328 | |
| 179 | N | A | -2.2271 | |
| 180 | T | A | -1.4774 | |
| 181 | P | A | -1.5251 | |
| 182 | E | A | -2.1113 | |
| 183 | T | A | -1.6507 | |
| 184 | C | A | 0.0000 | |
| 185 | P | A | -0.9098 | |
| 186 | P | A | -0.8630 | |
| 187 | T | A | -1.1319 | |
| 188 | E | A | -1.7871 | |
| 189 | Y | A | -0.7178 | |
| 190 | S | A | 0.0000 | |
| 191 | S | A | -0.9286 | |
| 192 | Y | A | -0.5604 | |
| 193 | F | A | 0.0000 | |
| 194 | K | A | -0.9922 | |
| 195 | H | A | -1.0153 | |
| 196 | V | A | -0.1052 | |
| 197 | C | A | 0.0000 | |
| 198 | P | A | -0.8954 | |
| 199 | R | A | -1.3197 | |
| 200 | S | A | 0.0000 | |
| 201 | Y | A | -0.5444 | |
| 202 | S | A | 0.0000 | |
| 203 | Y | A | 0.2233 | |
| 204 | A | A | -0.0456 | |
| 205 | Y | A | -0.8357 | |
| 206 | D | A | -1.2232 | |
| 207 | D | A | -2.0507 | |
| 208 | K | A | -2.4048 | |
| 209 | T | A | -1.5930 | |
| 210 | S | A | 0.0000 | |
| 211 | T | A | -0.8873 | |
| 212 | F | A | -0.1920 | |
| 213 | T | A | 0.1501 | |
| 214 | C | A | 0.0000 | |
| 215 | V | A | -1.0264 | |
| 216 | G | A | -1.2736 | |
| 217 | A | A | 0.0000 | |
| 218 | D | A | -1.3342 | |
| 219 | Y | A | 0.0000 | |
| 220 | M | A | 0.0931 | |
| 221 | I | A | 0.0000 | |
| 222 | I | A | 0.2375 | |
| 223 | F | A | 0.0000 | |
| 224 | C | A | -0.4654 | |
| 225 | P | A | 0.0000 | |
| 226 | L | A | 1.1021 | |
| 227 | P | A | 0.6207 | |
| 228 | H | A | -0.2105 |