Project name: c5ffa7a202e0a2b

Status: done

Started: 2026-06-22 16:04:48
Settings
Chain sequence(s) B: APPMPKRKLIEEMRKGFEKMKEVIKEMGFEEEAEELYKKLMEKLEKMEAL
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:36)
Show buried residues

Minimal score value
-4.5526
Maximal score value
0.6864
Average score
-2.4799
Total score value
-123.9944

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A B -0.0462
2 P B -0.2469
3 P B -0.2133
4 M B -0.4917
5 P B -1.4374
6 K B -2.5259
7 R B -3.6658
8 K B -3.5441
9 L B -2.5551
10 I B 0.0000
11 E B -4.5526
12 E B -4.3749
13 M B -3.1736
14 R B -4.1453
15 K B -4.4023
16 G B -3.1216
17 F B -2.6754
18 E B -3.5450
19 K B -3.3377
20 M B -1.8543
21 K B -3.1610
22 E B -3.0220
23 V B -1.1726
24 I B -1.5215
25 K B -2.8294
26 E B -1.9696
27 M B -0.1569
28 G B -0.8958
29 F B -1.2367
30 E B -3.3718
31 E B -3.8714
32 E B -3.8042
33 A B 0.0000
34 E B -4.1786
35 E B -4.3173
36 L B -2.7431
37 Y B -3.3907
38 K B -3.8474
39 K B -3.7048
40 L B -2.8692
41 M B -3.2284
42 E B -4.1419
43 K B -3.6653
44 L B 0.0000
45 E B -3.7237
46 K B -3.0168
47 M B -1.5897
48 E B -2.4609
49 A B -0.8810
50 L B 0.6864
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Laboratory of Theory of Biopolymers 2018