Chain sequence(s) |
A: VKIVSRKSLGVQNVYDIGVEKDHNFLLANGLIASNEGTFTSDVSSYLEGQAAKEFIAWLVRGRG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52) [INFO] Main: Simulation completed successfully. (00:00:52) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | V | A | 1.6053 | |
2 | K | A | 0.5385 | |
3 | I | A | 1.9288 | |
4 | V | A | 1.9647 | |
5 | S | A | -0.2646 | |
6 | R | A | -1.9759 | |
7 | K | A | -2.4147 | |
8 | S | A | -0.6397 | |
9 | L | A | 0.7409 | |
10 | G | A | 0.4297 | |
11 | V | A | 1.2108 | |
12 | Q | A | -0.1716 | |
13 | N | A | -0.3587 | |
14 | V | A | 1.3892 | |
15 | Y | A | 1.0926 | |
16 | D | A | -0.3532 | |
17 | I | A | 0.3144 | |
18 | G | A | -1.2776 | |
19 | V | A | -2.1485 | |
20 | E | A | -3.0434 | |
21 | K | A | -3.7726 | |
22 | D | A | -3.9660 | |
23 | H | A | -3.8407 | |
24 | N | A | -1.9915 | |
25 | F | A | 0.5481 | |
26 | L | A | 2.5404 | |
27 | L | A | 1.6930 | |
28 | A | A | 0.4378 | |
29 | N | A | -0.3366 | |
30 | G | A | 0.7409 | |
31 | L | A | 2.4838 | |
32 | I | A | 2.7015 | |
33 | A | A | 1.1114 | |
34 | S | A | -0.8874 | |
35 | N | A | -2.2670 | |
36 | E | A | -2.5252 | |
37 | G | A | -1.5581 | |
38 | T | A | -0.6321 | |
39 | F | A | 0.7800 | |
40 | T | A | -0.2079 | |
41 | S | A | -0.3381 | |
42 | D | A | -0.6678 | |
43 | V | A | 0.7870 | |
44 | S | A | 0.1224 | |
45 | S | A | -0.1901 | |
46 | Y | A | 0.8963 | |
47 | L | A | 0.6973 | |
48 | E | A | -1.4893 | |
49 | G | A | -0.7724 | |
50 | Q | A | -0.9549 | |
51 | A | A | -0.6692 | |
52 | A | A | -0.4272 | |
53 | K | A | -1.3887 | |
54 | E | A | -0.8663 | |
55 | F | A | 1.9472 | |
56 | I | A | 2.4512 | |
57 | A | A | 1.2422 | |
58 | W | A | 1.2364 | |
59 | L | A | 1.7678 | |
60 | V | A | 1.7778 | |
61 | R | A | -0.5723 | |
62 | G | A | -1.0648 | |
63 | R | A | -2.1231 | |
64 | G | A | -1.3971 |