| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWTAPDAAFDSFAIEYFEDWWSGEAIVLTVPGSERSCDLTGLKPGTEYSVTIRGVKGGYPSSPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40)
[INFO] Main: Simulation completed successfully. (00:00:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.2597 | |
| 2 | P | A | -0.4256 | |
| 3 | A | A | -0.7068 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.0657 | |
| 6 | N | A | -1.4105 | |
| 7 | L | A | -0.1405 | |
| 8 | V | A | 1.1925 | |
| 9 | V | A | 0.6442 | |
| 10 | S | A | -0.6033 | |
| 11 | R | A | -2.0072 | |
| 12 | V | A | -1.0693 | |
| 13 | T | A | -1.8368 | |
| 14 | E | A | -3.1253 | |
| 15 | D | A | -2.8762 | |
| 16 | S | A | -2.1334 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.2864 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.4420 | |
| 21 | W | A | 0.0000 | |
| 22 | T | A | -1.3040 | |
| 23 | A | A | -1.4233 | |
| 24 | P | A | -1.4044 | |
| 25 | D | A | -2.2826 | |
| 26 | A | A | -1.4818 | |
| 27 | A | A | -1.2108 | |
| 28 | F | A | 0.0000 | |
| 29 | D | A | -2.4709 | |
| 30 | S | A | -1.6094 | |
| 31 | F | A | 0.0000 | |
| 32 | A | A | 0.1132 | |
| 33 | I | A | 0.0000 | |
| 34 | E | A | 0.4456 | |
| 35 | Y | A | 0.0000 | |
| 36 | F | A | 0.5304 | |
| 37 | E | A | -0.4277 | |
| 38 | D | A | -0.6255 | |
| 39 | W | A | 0.7784 | |
| 40 | W | A | 0.7538 | |
| 41 | S | A | -0.2244 | |
| 42 | G | A | -0.6924 | |
| 43 | E | A | -1.2380 | |
| 44 | A | A | 0.3063 | |
| 45 | I | A | 1.6172 | |
| 46 | V | A | 2.1213 | |
| 47 | L | A | 1.1876 | |
| 48 | T | A | 0.3391 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -1.1730 | |
| 51 | G | A | 0.0000 | |
| 52 | S | A | -1.6681 | |
| 53 | E | A | -1.7140 | |
| 54 | R | A | -1.2755 | |
| 55 | S | A | -0.8577 | |
| 56 | C | A | -1.0533 | |
| 57 | D | A | -1.7219 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.4047 | |
| 60 | G | A | -1.5444 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -2.9919 | |
| 63 | P | A | -2.4472 | |
| 64 | G | A | -1.6838 | |
| 65 | T | A | 0.0000 | |
| 66 | E | A | -0.6178 | |
| 67 | Y | A | 0.0000 | |
| 68 | S | A | 0.3221 | |
| 69 | V | A | 0.0000 | |
| 70 | T | A | 0.1963 | |
| 71 | I | A | 0.0000 | |
| 72 | R | A | -0.6349 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | -0.8152 | |
| 75 | K | A | -1.6536 | |
| 76 | G | A | -1.2163 | |
| 77 | G | A | -0.6496 | |
| 78 | Y | A | 0.3825 | |
| 79 | P | A | -0.1431 | |
| 80 | S | A | 0.0000 | |
| 81 | S | A | -0.1886 | |
| 82 | P | A | -0.6066 | |
| 83 | L | A | -0.5150 | |
| 84 | S | A | 0.0721 | |
| 85 | A | A | 1.2051 | |
| 86 | I | A | 1.8359 | |
| 87 | F | A | 0.0000 | |
| 88 | T | A | -0.6569 | |
| 89 | T | A | -1.7508 |