| Chain sequence(s) |
A: LPAPKNLWSRVTEDSARLSWTAPDAAFDSFWIRYFEFLGSGEAIVLTVPGSERSYDLTGLKPGTEYWQIIGVKGGHISLPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44)
[INFO] Main: Simulation completed successfully. (00:00:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.2951 | |
| 2 | P | A | 0.5437 | |
| 3 | A | A | 0.6174 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.8578 | |
| 6 | N | A | -1.5346 | |
| 7 | L | A | -0.3997 | |
| 8 | W | A | -0.0001 | |
| 9 | S | A | 0.0000 | |
| 10 | R | A | -2.0068 | |
| 11 | V | A | -1.3890 | |
| 12 | T | A | -1.6556 | |
| 13 | E | A | -2.7708 | |
| 14 | D | A | -2.7499 | |
| 15 | S | A | -2.3231 | |
| 16 | A | A | 0.0000 | |
| 17 | R | A | -2.2645 | |
| 18 | L | A | 0.0000 | |
| 19 | S | A | -0.9691 | |
| 20 | W | A | 0.0000 | |
| 21 | T | A | -1.2526 | |
| 22 | A | A | -1.3447 | |
| 23 | P | A | -1.3187 | |
| 24 | D | A | -2.2640 | |
| 25 | A | A | -1.4432 | |
| 26 | A | A | -1.0791 | |
| 27 | F | A | 0.0000 | |
| 28 | D | A | -2.6946 | |
| 29 | S | A | -1.1111 | |
| 30 | F | A | 0.0000 | |
| 31 | W | A | 0.7483 | |
| 32 | I | A | 0.0000 | |
| 33 | R | A | 0.1691 | |
| 34 | Y | A | 0.9423 | |
| 35 | F | A | 1.3230 | |
| 36 | E | A | 0.3272 | |
| 37 | F | A | 2.1880 | |
| 38 | L | A | 1.7905 | |
| 39 | G | A | 0.4325 | |
| 40 | S | A | -0.1896 | |
| 41 | G | A | -0.5455 | |
| 42 | E | A | -1.7234 | |
| 43 | A | A | -0.3204 | |
| 44 | I | A | 0.4688 | |
| 45 | V | A | 0.9800 | |
| 46 | L | A | 0.8746 | |
| 47 | T | A | 0.3178 | |
| 48 | V | A | 0.0000 | |
| 49 | P | A | -1.0670 | |
| 50 | G | A | 0.0000 | |
| 51 | S | A | -1.5933 | |
| 52 | E | A | -1.6518 | |
| 53 | R | A | -1.0877 | |
| 54 | S | A | -0.8834 | |
| 55 | Y | A | -1.0424 | |
| 56 | D | A | -2.1384 | |
| 57 | L | A | 0.0000 | |
| 58 | T | A | -1.5516 | |
| 59 | G | A | -1.5237 | |
| 60 | L | A | 0.0000 | |
| 61 | K | A | -2.3220 | |
| 62 | P | A | -1.6443 | |
| 63 | G | A | -0.1755 | |
| 64 | T | A | 1.2315 | |
| 65 | E | A | 0.0000 | |
| 66 | Y | A | 2.2952 | |
| 67 | W | A | 0.0000 | |
| 68 | Q | A | 0.4626 | |
| 69 | I | A | 0.0000 | |
| 70 | I | A | 0.0000 | |
| 71 | G | A | 0.0000 | |
| 72 | V | A | -0.2655 | |
| 73 | K | A | -1.5729 | |
| 74 | G | A | -1.5123 | |
| 75 | G | A | -1.2414 | |
| 76 | H | A | -0.7797 | |
| 77 | I | A | 1.4744 | |
| 78 | S | A | 0.0000 | |
| 79 | L | A | 2.0642 | |
| 80 | P | A | 0.7080 | |
| 81 | L | A | -0.1213 | |
| 82 | S | A | 0.4279 | |
| 83 | A | A | 1.5733 | |
| 84 | I | A | 2.8104 | |
| 85 | F | A | 1.7986 | |
| 86 | T | A | 0.5322 | |
| 87 | T | A | -1.5823 |