Project name: P1A9

Status: done

Started: 2026-06-05 01:42:16
Settings
Chain sequence(s) H: QVQLQQPGAELVKPGASVKLSCKASGYTFTNYWMHWVKQRPGRGLEWIGRIDPDNGETNYNEKFKTKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARRAYYSKNALDYWGQGTSVTVSS
L: DAVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPYTFGGGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:24)
Show buried residues

Minimal score value
-3.3341
Maximal score value
1.4351
Average score
-0.6381
Total score value
-148.0384

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5679
2 V H -1.2091
3 Q H -2.0580
4 L H 0.0000
5 Q H -2.1871
6 Q H 0.0000
7 P H -1.0125
8 G H -0.9522
9 A H -0.1770
11 E H -0.2356
12 L H 0.8692
13 V H -0.2178
14 K H -1.6536
15 P H -1.3744
16 G H -1.1218
17 A H -0.8696
18 S H -1.0264
19 V H 0.0000
20 K H -1.7725
21 L H 0.0000
22 S H -0.7855
23 C H 0.0000
24 K H -1.7545
25 A H 0.0000
26 S H -1.3439
27 G H -1.0959
28 Y H -0.6064
29 T H -0.5103
30 F H 0.0000
35 T H -1.6176
36 N H -1.1107
37 Y H -0.0640
38 W H -0.3667
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.9874
45 R H -1.5878
46 P H -1.2055
47 G H -1.6126
48 R H -2.5311
49 G H -1.4837
50 L H 0.0000
51 E H -1.2069
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 R H -0.6416
56 I H 0.0000
57 D H -1.8790
58 P H 0.0000
59 D H -3.1879
62 N H -2.7374
63 G H -2.1788
64 E H -2.5191
65 T H -1.2406
66 N H -0.9518
67 Y H -1.2385
68 N H -2.0052
69 E H -3.3341
70 K H -3.1823
71 F H 0.0000
72 K H -2.9529
74 T H -1.6369
75 K H -1.4196
76 A H 0.0000
77 T H -0.7245
78 L H 0.0000
79 T H -0.5204
80 V H -0.7549
81 D H -1.3261
82 K H -1.8237
83 P H -0.9723
84 S H -0.9066
85 S H -1.0013
86 T H 0.0000
87 A H 0.0000
88 Y H -0.3703
89 M H 0.0000
90 Q H -1.1926
91 L H 0.0000
92 S H -0.7688
93 S H -0.7930
94 L H 0.0000
95 T H -1.2609
96 S H -1.4552
97 E H -2.0109
98 D H 0.0000
99 S H -0.6667
100 A H 0.0000
101 V H 0.0079
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 R H 0.1767
108 A H 0.0000
109 Y H 1.4327
110 Y H 1.4351
111 S H 0.3350
112 K H -0.3932
113 N H -0.0342
114 A H 0.0000
115 L H 0.0000
116 D H -0.3316
117 Y H -0.2219
118 W H -0.6300
119 G H 0.0000
120 Q H -1.5647
121 G H 0.0000
122 T H 0.0000
123 S H -0.1868
124 V H 0.0000
125 T H -0.1481
126 V H 0.0000
127 S H -0.6309
128 S H -0.7493
1 D L -1.4920
2 A L 0.0000
3 V L 0.6820
4 M L 0.0000
5 T L -0.3307
6 Q L 0.0000
7 T L 0.0073
8 P L 0.4390
9 L L 1.1706
10 S L 0.1477
11 L L -0.1829
12 P L -0.8280
13 V L 0.0000
14 S L -0.6131
15 L L 0.0965
16 G L -1.1059
17 D L -1.4303
18 Q L -1.9872
19 A L 0.0000
20 S L -0.8028
21 I L 0.0000
22 S L -0.7561
23 C L 0.0000
24 R L -2.2271
25 S L 0.0000
26 S L -0.9814
27 Q L -1.5035
28 S L -0.8764
29 L L 0.0000
30 V L 0.1979
31 H L -0.6826
32 S L -0.9573
34 N L -1.6368
35 G L -1.0956
36 N L -0.8905
37 T L -0.3349
38 Y L 0.0000
39 L L 0.0000
40 H L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 L L 0.0000
44 Q L -0.7469
45 K L -1.0710
46 P L -0.6927
47 G L -1.0601
48 Q L -1.3382
49 S L -0.9516
50 P L 0.0000
51 K L -1.1214
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.0000
56 K L -0.8819
57 V L 0.0000
65 S L -0.9697
66 N L -1.3612
67 R L -1.6370
68 F L -0.7839
69 S L -0.5733
70 G L -0.7909
71 V L -0.8300
72 P L -1.2015
74 D L -2.1564
75 R L -2.0685
76 F L 0.0000
77 S L -1.3436
78 G L 0.0000
79 S L -0.9040
80 G L -1.0335
83 S L -0.7137
84 G L -0.7197
85 T L -1.3969
86 D L -1.9161
87 F L 0.0000
88 T L -0.9678
89 L L 0.0000
90 K L -1.6607
91 I L 0.0000
92 S L -2.3498
93 R L -2.7220
94 V L 0.0000
95 E L -1.8932
96 A L -0.9883
97 E L -2.0452
98 D L 0.0000
99 L L -0.7031
100 G L 0.0000
101 V L -0.0796
102 Y L 0.0000
103 F L 0.0000
104 C L 0.0000
105 S L 0.0000
106 Q L 0.0000
107 S L 0.0000
108 T L 0.0000
109 H L 0.0306
114 V L 0.8382
115 P L -0.3000
116 Y L 0.0000
117 T L 0.1426
118 F L 0.1945
119 G L 0.0000
120 G L -0.4758
121 G L 0.0000
122 T L 0.0000
123 K L -0.6637
124 L L 0.0000
125 E L -0.8415
126 L L -0.3856
127 K L -1.3362
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Laboratory of Theory of Biopolymers 2018