| Chain sequence(s) |
A: SSLVASPSGEIALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVLKTSSSRLSI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:11)
[INFO] Main: Simulation completed successfully. (00:07:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 0.3043 | |
| 2 | S | A | 1.1164 | |
| 3 | L | A | 2.9425 | |
| 4 | V | A | 2.8419 | |
| 5 | A | A | 1.4903 | |
| 6 | S | A | 0.4313 | |
| 7 | P | A | -0.4225 | |
| 8 | S | A | -0.8859 | |
| 9 | G | A | -1.0682 | |
| 10 | E | A | -0.9379 | |
| 11 | I | A | 1.7623 | |
| 12 | A | A | 1.5083 | |
| 13 | L | A | 1.6324 | |
| 14 | S | A | 0.4829 | |
| 15 | S | A | 0.0000 | |
| 16 | E | A | -1.7915 | |
| 17 | E | A | -1.2785 | |
| 18 | K | A | -1.3580 | |
| 19 | V | A | 0.0000 | |
| 20 | Y | A | -1.0310 | |
| 21 | N | A | -1.7835 | |
| 22 | V | A | 0.0000 | |
| 23 | V | A | 0.0000 | |
| 24 | L | A | -0.5967 | |
| 25 | K | A | -1.6635 | |
| 26 | Q | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | A | A | -1.0521 | |
| 29 | L | A | -0.8775 | |
| 30 | V | A | 0.0000 | |
| 31 | N | A | -2.1310 | |
| 32 | K | A | -2.5684 | |
| 33 | Q | A | -1.5901 | |
| 34 | L | A | -0.4582 | |
| 35 | R | A | -2.2334 | |
| 36 | S | A | -1.3192 | |
| 37 | S | A | -0.6140 | |
| 38 | S | A | -0.1640 | |
| 39 | Y | A | 0.4179 | |
| 40 | D | A | -1.2028 | |
| 41 | L | A | 0.1314 | |
| 42 | D | A | -1.3138 | |
| 43 | V | A | -0.4675 | |
| 44 | K | A | -2.4795 | |
| 45 | K | A | -3.0430 | |
| 46 | P | A | -2.2192 | |
| 47 | Q | A | -2.1846 | |
| 48 | D | A | -1.1748 | |
| 49 | V | A | 1.6411 | |
| 50 | V | A | 2.5847 | |
| 51 | L | A | 2.6271 | |
| 52 | P | A | 1.5391 | |
| 53 | G | A | 0.9472 | |
| 54 | S | A | 1.6572 | |
| 55 | L | A | 1.9936 | |
| 56 | S | A | 0.5147 | |
| 57 | L | A | 0.4338 | |
| 58 | L | A | 0.0448 | |
| 59 | G | A | -1.0196 | |
| 60 | E | A | -2.2531 | |
| 61 | A | A | 0.0000 | |
| 62 | Y | A | 0.0000 | |
| 63 | D | A | -3.4086 | |
| 64 | R | A | -2.9798 | |
| 65 | C | A | 0.0000 | |
| 66 | G | A | 0.0000 | |
| 67 | E | A | -3.0260 | |
| 68 | V | A | -1.6859 | |
| 69 | C | A | 0.0000 | |
| 70 | A | A | -1.4912 | |
| 71 | E | A | -2.1199 | |
| 72 | Y | A | -0.3137 | |
| 73 | A | A | -0.4760 | |
| 74 | K | A | -1.4805 | |
| 75 | T | A | -0.1794 | |
| 76 | F | A | 0.9219 | |
| 77 | Y | A | 0.3890 | |
| 78 | L | A | 1.2936 | |
| 79 | G | A | 0.9482 | |
| 80 | T | A | 0.0000 | |
| 81 | L | A | 1.1508 | |
| 82 | L | A | 1.0793 | |
| 83 | M | A | 0.0000 | |
| 84 | T | A | -0.7742 | |
| 85 | P | A | -1.3813 | |
| 86 | E | A | -2.5571 | |
| 87 | R | A | -1.5785 | |
| 88 | R | A | -1.2931 | |
| 89 | K | A | -1.9153 | |
| 90 | A | A | 0.0000 | |
| 91 | I | A | 0.0000 | |
| 92 | W | A | 0.0000 | |
| 93 | A | A | 0.0000 | |
| 94 | I | A | 0.0000 | |
| 95 | Y | A | 0.2502 | |
| 96 | V | A | 0.0000 | |
| 97 | W | A | 0.0000 | |
| 98 | C | A | 0.0000 | |
| 99 | R | A | -0.7636 | |
| 100 | R | A | -1.1045 | |
| 101 | T | A | 0.0000 | |
| 102 | D | A | -2.0348 | |
| 103 | E | A | -2.2167 | |
| 104 | L | A | -1.3834 | |
| 105 | V | A | 0.0000 | |
| 106 | D | A | -2.5044 | |
| 107 | G | A | -1.9759 | |
| 108 | P | A | -1.5379 | |
| 109 | N | A | -2.0655 | |
| 110 | A | A | -1.6323 | |
| 111 | S | A | -1.2472 | |
| 112 | H | A | -1.3324 | |
| 113 | I | A | -0.4873 | |
| 114 | T | A | -0.2651 | |
| 115 | P | A | -0.3115 | |
| 116 | M | A | -0.1913 | |
| 117 | A | A | -0.7454 | |
| 118 | L | A | 0.0000 | |
| 119 | D | A | -2.2473 | |
| 120 | R | A | -2.6462 | |
| 121 | W | A | 0.0000 | |
| 122 | E | A | -2.2536 | |
| 123 | A | A | -2.3797 | |
| 124 | R | A | -2.3945 | |
| 125 | L | A | 0.0000 | |
| 126 | E | A | -3.4649 | |
| 127 | D | A | -3.6036 | |
| 128 | L | A | 0.0000 | |
| 129 | F | A | -2.1435 | |
| 130 | R | A | -3.4669 | |
| 131 | G | A | -2.4419 | |
| 132 | R | A | -3.0278 | |
| 133 | P | A | -1.2463 | |
| 134 | F | A | 0.8590 | |
| 135 | D | A | 0.3158 | |
| 136 | M | A | 0.2170 | |
| 137 | L | A | -0.0978 | |
| 138 | D | A | 0.0000 | |
| 139 | A | A | 0.1374 | |
| 140 | A | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | A | A | -0.8205 | |
| 143 | D | A | -0.4771 | |
| 144 | T | A | 0.0000 | |
| 145 | V | A | -0.2082 | |
| 146 | A | A | -0.5421 | |
| 147 | R | A | -0.8790 | |
| 148 | Y | A | -0.2820 | |
| 149 | P | A | -0.2320 | |
| 150 | V | A | 0.0000 | |
| 151 | D | A | 0.0000 | |
| 152 | I | A | -0.0986 | |
| 153 | Q | A | -0.4836 | |
| 154 | P | A | 0.0000 | |
| 155 | F | A | 0.0000 | |
| 156 | R | A | -1.1911 | |
| 157 | D | A | 0.0000 | |
| 158 | M | A | 0.0000 | |
| 159 | I | A | 0.0000 | |
| 160 | E | A | -1.4451 | |
| 161 | G | A | 0.0000 | |
| 162 | M | A | 0.0000 | |
| 163 | R | A | -1.1114 | |
| 164 | M | A | 0.0000 | |
| 165 | D | A | 0.0000 | |
| 166 | L | A | -0.7670 | |
| 167 | K | A | -2.0516 | |
| 168 | K | A | -2.0521 | |
| 169 | S | A | -1.5954 | |
| 170 | R | A | -1.7229 | |
| 171 | Y | A | 0.0000 | |
| 172 | Q | A | -2.1795 | |
| 173 | N | A | -1.7425 | |
| 174 | F | A | -0.8537 | |
| 175 | D | A | -1.4972 | |
| 176 | D | A | -1.3686 | |
| 177 | L | A | 0.0000 | |
| 178 | Y | A | 0.0000 | |
| 179 | L | A | -0.4526 | |
| 180 | Y | A | 0.0000 | |
| 181 | C | A | 0.0000 | |
| 182 | Y | A | 0.0000 | |
| 183 | Y | A | 0.0000 | |
| 184 | V | A | 0.0279 | |
| 185 | A | A | 0.2303 | |
| 186 | G | A | 0.0000 | |
| 187 | T | A | 0.0000 | |
| 188 | V | A | 0.6387 | |
| 189 | G | A | 0.2170 | |
| 190 | L | A | 0.0000 | |
| 191 | M | A | 0.0000 | |
| 192 | S | A | 0.1071 | |
| 193 | V | A | 0.0000 | |
| 194 | P | A | 0.0000 | |
| 195 | V | A | 0.0000 | |
| 196 | M | A | 0.0000 | |
| 197 | G | A | 0.0164 | |
| 198 | I | A | -0.2092 | |
| 199 | D | A | 0.0000 | |
| 200 | P | A | -1.2720 | |
| 201 | K | A | -2.2400 | |
| 202 | S | A | -1.7868 | |
| 203 | K | A | -2.1901 | |
| 204 | A | A | -1.3746 | |
| 205 | T | A | -0.8137 | |
| 206 | T | A | -0.6247 | |
| 207 | E | A | -0.7329 | |
| 208 | S | A | -0.9050 | |
| 209 | V | A | 0.0000 | |
| 210 | Y | A | 0.0000 | |
| 211 | N | A | -0.8577 | |
| 212 | A | A | 0.0000 | |
| 213 | A | A | -0.5407 | |
| 214 | L | A | 0.0000 | |
| 215 | A | A | 0.0000 | |
| 216 | L | A | -0.3841 | |
| 217 | G | A | 0.0784 | |
| 218 | I | A | 0.0000 | |
| 219 | A | A | 0.0000 | |
| 220 | N | A | -0.2911 | |
| 221 | Q | A | -0.2548 | |
| 222 | L | A | 0.0000 | |
| 223 | T | A | 0.0000 | |
| 224 | N | A | -0.4255 | |
| 225 | I | A | 0.0000 | |
| 226 | L | A | 0.0000 | |
| 227 | R | A | -1.0204 | |
| 228 | D | A | -1.3661 | |
| 229 | V | A | 0.0000 | |
| 230 | G | A | 0.0000 | |
| 231 | E | A | -2.9254 | |
| 232 | D | A | -2.3445 | |
| 233 | A | A | 0.0000 | |
| 234 | R | A | -3.2044 | |
| 235 | R | A | -3.3471 | |
| 236 | G | A | -2.1182 | |
| 237 | R | A | -2.0158 | |
| 238 | V | A | 0.0000 | |
| 239 | Y | A | 0.0000 | |
| 240 | L | A | 0.0000 | |
| 241 | P | A | 0.0000 | |
| 242 | Q | A | -1.8077 | |
| 243 | D | A | -2.2345 | |
| 244 | E | A | -1.5034 | |
| 245 | L | A | 0.0000 | |
| 246 | A | A | -1.2879 | |
| 247 | Q | A | -1.7424 | |
| 248 | A | A | -1.7508 | |
| 249 | G | A | -1.2056 | |
| 250 | L | A | 0.0000 | |
| 251 | S | A | -1.2206 | |
| 252 | D | A | -1.2069 | |
| 253 | E | A | -1.9320 | |
| 254 | D | A | -1.3163 | |
| 255 | I | A | 0.0000 | |
| 256 | F | A | -0.4977 | |
| 257 | A | A | -0.5861 | |
| 258 | G | A | -0.7765 | |
| 259 | K | A | -1.5950 | |
| 260 | V | A | -1.3206 | |
| 261 | T | A | -2.0391 | |
| 262 | D | A | -3.0679 | |
| 263 | K | A | -2.9661 | |
| 264 | W | A | 0.0000 | |
| 265 | R | A | -2.7628 | |
| 266 | N | A | -2.7653 | |
| 267 | F | A | 0.0000 | |
| 268 | M | A | 0.0000 | |
| 269 | K | A | -2.2049 | |
| 270 | M | A | -1.1028 | |
| 271 | Q | A | 0.0000 | |
| 272 | L | A | 0.0000 | |
| 273 | K | A | -1.8437 | |
| 274 | R | A | -0.9868 | |
| 275 | A | A | 0.0000 | |
| 276 | R | A | -1.3734 | |
| 277 | M | A | -0.7025 | |
| 278 | F | A | -0.8558 | |
| 279 | F | A | 0.0000 | |
| 280 | D | A | -2.1477 | |
| 281 | E | A | -2.7317 | |
| 282 | A | A | 0.0000 | |
| 283 | E | A | -1.9535 | |
| 284 | K | A | -2.7263 | |
| 285 | G | A | 0.0000 | |
| 286 | V | A | 0.0000 | |
| 287 | T | A | -0.5985 | |
| 288 | E | A | -1.3990 | |
| 289 | L | A | 0.0000 | |
| 290 | S | A | 0.0000 | |
| 291 | A | A | 0.3209 | |
| 292 | A | A | 0.1388 | |
| 293 | S | A | 0.0000 | |
| 294 | R | A | 0.3921 | |
| 295 | W | A | 0.9659 | |
| 296 | P | A | 0.0000 | |
| 297 | V | A | 0.0000 | |
| 298 | W | A | 0.0000 | |
| 299 | A | A | 0.0000 | |
| 300 | S | A | 0.2147 | |
| 301 | L | A | 0.0000 | |
| 302 | L | A | 0.1632 | |
| 303 | L | A | 0.2958 | |
| 304 | Y | A | 0.0560 | |
| 305 | R | A | -0.7852 | |
| 306 | R | A | -1.0016 | |
| 307 | I | A | 0.0000 | |
| 308 | L | A | 0.0000 | |
| 309 | D | A | -1.8589 | |
| 310 | E | A | -1.3839 | |
| 311 | I | A | 0.0000 | |
| 312 | E | A | -1.9104 | |
| 313 | A | A | -1.2164 | |
| 314 | N | A | -1.7058 | |
| 315 | D | A | -1.7161 | |
| 316 | Y | A | 0.0000 | |
| 317 | N | A | -1.5413 | |
| 318 | N | A | 0.0000 | |
| 319 | F | A | 0.0000 | |
| 320 | T | A | -1.3373 | |
| 321 | K | A | -1.9554 | |
| 322 | R | A | -2.1367 | |
| 323 | A | A | 0.0000 | |
| 324 | Y | A | 0.3253 | |
| 325 | V | A | 0.0000 | |
| 326 | G | A | -0.2415 | |
| 327 | K | A | -0.7278 | |
| 328 | V | A | 0.9437 | |
| 329 | K | A | -0.3258 | |
| 330 | K | A | -0.0261 | |
| 331 | I | A | 1.7870 | |
| 332 | A | A | 0.9432 | |
| 333 | A | A | 0.0000 | |
| 334 | L | A | 1.2711 | |
| 335 | P | A | 0.9992 | |
| 336 | L | A | 1.2529 | |
| 337 | A | A | 0.0000 | |
| 338 | Y | A | 2.0700 | |
| 339 | A | A | 1.4644 | |
| 340 | K | A | 0.8549 | |
| 341 | S | A | 0.0000 | |
| 342 | V | A | 2.2255 | |
| 343 | L | A | 1.5343 | |
| 344 | K | A | -0.7081 | |
| 345 | T | A | -0.9408 | |
| 346 | S | A | -0.8452 | |
| 347 | S | A | -0.8584 | |
| 348 | S | A | -0.7815 | |
| 349 | R | A | -0.9098 | |
| 350 | L | A | 1.0566 | |
| 351 | S | A | 0.8749 | |
| 352 | I | A | 1.9498 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine