Project name: query_structure

Status: done

Started: 2026-03-17 01:19:38
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDALHYSGRGKVHYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYQSYGYWYYMSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:01)
Show buried residues

Minimal score value
-2.5702
Maximal score value
2.0712
Average score
-0.373
Total score value
-36.5504

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.8289
2 S A 0.9649
3 S A 0.8906
4 V A 1.4656
5 P A -0.1402
6 T A -1.2489
7 K A -2.2945
8 L A 0.0000
9 E A -1.4765
10 V A 0.3895
11 V A 1.6750
12 A A 0.9720
13 A A 0.3360
14 T A -0.1994
15 P A -0.7888
16 T A -0.5242
17 S A -0.3070
18 L A 0.0000
19 L A 0.8445
20 I A 0.0000
21 S A -0.6595
22 W A 0.0000
23 D A -2.5664
24 A A -1.1889
25 L A -0.7543
26 H A -1.5056
27 Y A -0.8193
28 S A -1.1197
29 G A -1.6545
30 R A -2.5702
31 G A -2.2635
32 K A -2.4444
33 V A -0.9505
34 H A -0.8306
35 Y A -0.2766
36 Y A 0.0000
37 R A -0.4694
38 I A 0.0000
39 T A -0.6577
40 Y A -0.4477
41 G A 0.0000
42 E A -1.5190
43 T A -1.3574
44 G A -1.2919
45 G A -1.4844
46 N A -1.5730
47 S A -0.9272
48 P A -0.4243
49 V A 0.2518
50 Q A -1.2248
51 E A -1.8593
52 F A -0.7713
53 T A -0.2843
54 V A -0.0624
55 P A -0.3752
56 G A -0.6309
57 S A -0.5772
58 S A -0.4574
59 S A -0.5893
60 T A -0.2012
61 A A 0.0000
62 T A 0.3262
63 I A 0.0000
64 S A -0.4721
65 G A -0.6798
66 L A 0.0000
67 S A -0.8472
68 P A -0.9883
69 G A -1.0903
70 V A -1.0392
71 D A -2.0881
72 Y A 0.0000
73 T A -0.8233
74 I A 0.0000
75 T A -0.3376
76 V A 0.0000
77 Y A 0.5631
78 A A 0.0000
79 Y A 0.6388
80 Y A 0.1374
81 Q A -0.0002
82 S A 0.4221
83 Y A 1.4950
84 G A 0.8385
85 Y A 1.7869
86 W A 1.7592
87 Y A 2.0712
88 Y A 1.8268
89 M A 1.1411
90 S A 0.5073
91 P A 0.1802
92 I A 0.1285
93 S A -0.4897
94 I A -0.5550
95 N A -1.6834
96 Y A -1.4702
97 R A -2.4409
98 T A -1.2174
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Laboratory of Theory of Biopolymers 2018