| Chain sequence(s) |
A: MVPQALLFVPLLVFPLCFGKFPIDWLLLARGEPLIPKHNQSLPACSFYIEDRLHCVFQMNLVLFIDPLTRWGNPKVNSILNLFGSGLFDAAFVHCKLHICFRVADSSFLCHKAFFCGRSDYFRLLNRYLIISLTNTVPGPDVVKKCSQHTDLAIEYEVGVARALPQGSQGRCAQKCKLCARENSIEILSSTIKAYNAENNGGMSAEEEIGPGAEPMRGPSLATQLYPYDVPDYA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:31)
[INFO] Main: Simulation completed successfully. (00:02:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.6911 | |
| 2 | V | A | 2.0722 | |
| 3 | P | A | 0.8363 | |
| 4 | Q | A | 0.4553 | |
| 5 | A | A | 1.6417 | |
| 6 | L | A | 3.1297 | |
| 7 | L | A | 3.6094 | |
| 8 | F | A | 4.5250 | |
| 9 | V | A | 4.6429 | |
| 10 | P | A | 3.4467 | |
| 11 | L | A | 4.0290 | |
| 12 | L | A | 3.8509 | |
| 13 | V | A | 4.0527 | |
| 14 | F | A | 3.9141 | |
| 15 | P | A | 2.3060 | |
| 16 | L | A | 2.7768 | |
| 17 | C | A | 2.3062 | |
| 18 | F | A | 1.7998 | |
| 19 | G | A | 0.1954 | |
| 20 | K | A | -0.4906 | |
| 21 | F | A | 1.0694 | |
| 22 | P | A | 0.6236 | |
| 23 | I | A | 1.7315 | |
| 24 | D | A | 0.2790 | |
| 25 | W | A | 1.0339 | |
| 26 | L | A | 0.8825 | |
| 27 | L | A | 0.3472 | |
| 28 | L | A | 0.9388 | |
| 29 | A | A | -0.4362 | |
| 30 | R | A | -1.8230 | |
| 31 | G | A | -1.4711 | |
| 32 | E | A | -1.6094 | |
| 33 | P | A | -0.1105 | |
| 34 | L | A | 1.0461 | |
| 35 | I | A | 1.4309 | |
| 36 | P | A | -0.5048 | |
| 37 | K | A | -2.3633 | |
| 38 | H | A | -2.5641 | |
| 39 | N | A | -2.7399 | |
| 40 | Q | A | -2.2492 | |
| 41 | S | A | -0.7693 | |
| 42 | L | A | 1.1690 | |
| 43 | P | A | 0.6552 | |
| 44 | A | A | 0.8476 | |
| 45 | C | A | 0.8772 | |
| 46 | S | A | -0.0745 | |
| 47 | F | A | 0.0031 | |
| 48 | Y | A | 0.0954 | |
| 49 | I | A | 0.0000 | |
| 50 | E | A | -1.1046 | |
| 51 | D | A | -1.9071 | |
| 52 | R | A | -2.0758 | |
| 53 | L | A | -0.1055 | |
| 54 | H | A | -0.6534 | |
| 55 | C | A | 0.2790 | |
| 56 | V | A | 1.3176 | |
| 57 | F | A | 0.8117 | |
| 58 | Q | A | -0.4293 | |
| 59 | M | A | -0.0772 | |
| 60 | N | A | -0.4823 | |
| 61 | L | A | 1.2027 | |
| 62 | V | A | 3.0654 | |
| 63 | L | A | 3.1892 | |
| 64 | F | A | 3.3688 | |
| 65 | I | A | 2.8356 | |
| 66 | D | A | 0.5463 | |
| 67 | P | A | 0.2855 | |
| 68 | L | A | 0.7509 | |
| 69 | T | A | -0.5369 | |
| 70 | R | A | -1.1447 | |
| 71 | W | A | -0.0644 | |
| 72 | G | A | -1.1737 | |
| 73 | N | A | -1.8128 | |
| 74 | P | A | -1.3868 | |
| 75 | K | A | -1.5869 | |
| 76 | V | A | 0.2736 | |
| 77 | N | A | -0.7318 | |
| 78 | S | A | 0.2009 | |
| 79 | I | A | 0.8617 | |
| 80 | L | A | 0.8055 | |
| 81 | N | A | -0.4992 | |
| 82 | L | A | 0.0000 | |
| 83 | F | A | 0.8886 | |
| 84 | G | A | 0.2353 | |
| 85 | S | A | 0.0817 | |
| 86 | G | A | 0.6651 | |
| 87 | L | A | 1.7614 | |
| 88 | F | A | 1.7523 | |
| 89 | D | A | -0.0023 | |
| 90 | A | A | 1.0501 | |
| 91 | A | A | 1.4416 | |
| 92 | F | A | 2.4164 | |
| 93 | V | A | 2.0324 | |
| 94 | H | A | 0.2807 | |
| 95 | C | A | -0.0133 | |
| 96 | K | A | -1.4629 | |
| 97 | L | A | -0.8327 | |
| 98 | H | A | -1.7084 | |
| 99 | I | A | 0.0000 | |
| 100 | C | A | -0.3180 | |
| 101 | F | A | 0.0000 | |
| 102 | R | A | -0.4931 | |
| 103 | V | A | -0.0659 | |
| 104 | A | A | -0.6905 | |
| 105 | D | A | -1.8583 | |
| 106 | S | A | -0.8977 | |
| 107 | S | A | -0.1763 | |
| 108 | F | A | 1.2084 | |
| 109 | L | A | 1.0649 | |
| 110 | C | A | 0.5224 | |
| 111 | H | A | -0.3476 | |
| 112 | K | A | -0.8555 | |
| 113 | A | A | -0.4787 | |
| 114 | F | A | 0.0685 | |
| 115 | F | A | 0.0000 | |
| 116 | C | A | -1.3837 | |
| 117 | G | A | -1.4922 | |
| 118 | R | A | -2.4072 | |
| 119 | S | A | -1.8517 | |
| 120 | D | A | -2.3842 | |
| 121 | Y | A | -0.9478 | |
| 122 | F | A | 0.0000 | |
| 123 | R | A | -2.5311 | |
| 124 | L | A | -0.7269 | |
| 125 | L | A | -0.0523 | |
| 126 | N | A | -0.6176 | |
| 127 | R | A | -0.7901 | |
| 128 | Y | A | 1.2015 | |
| 129 | L | A | 1.1369 | |
| 130 | I | A | 1.1292 | |
| 131 | I | A | 1.4263 | |
| 132 | S | A | 0.8586 | |
| 133 | L | A | 1.2897 | |
| 134 | T | A | 0.3688 | |
| 135 | N | A | -0.3578 | |
| 136 | T | A | 0.3122 | |
| 137 | V | A | 0.8085 | |
| 138 | P | A | -0.2321 | |
| 139 | G | A | -0.3118 | |
| 140 | P | A | -0.4748 | |
| 141 | D | A | -0.5395 | |
| 142 | V | A | 1.0877 | |
| 143 | V | A | 1.2982 | |
| 144 | K | A | -0.4975 | |
| 145 | K | A | -1.7614 | |
| 146 | C | A | -1.5366 | |
| 147 | S | A | -1.4848 | |
| 148 | Q | A | -2.1537 | |
| 149 | H | A | -1.5170 | |
| 150 | T | A | -1.3316 | |
| 151 | D | A | -1.4525 | |
| 152 | L | A | 0.2229 | |
| 153 | A | A | 0.0070 | |
| 154 | I | A | 0.2207 | |
| 155 | E | A | -1.1267 | |
| 156 | Y | A | -0.2207 | |
| 157 | E | A | -0.9185 | |
| 158 | V | A | 0.8108 | |
| 159 | G | A | 0.3623 | |
| 160 | V | A | 1.2778 | |
| 161 | A | A | 0.3411 | |
| 162 | R | A | -0.9725 | |
| 163 | A | A | -0.0711 | |
| 164 | L | A | 0.3864 | |
| 165 | P | A | -0.5842 | |
| 166 | Q | A | -1.3563 | |
| 167 | G | A | -1.0943 | |
| 168 | S | A | -0.8651 | |
| 169 | Q | A | -1.5092 | |
| 170 | G | A | -1.0175 | |
| 171 | R | A | -2.0789 | |
| 172 | C | A | -0.9606 | |
| 173 | A | A | -1.9059 | |
| 174 | Q | A | -2.8347 | |
| 175 | K | A | -3.7337 | |
| 176 | C | A | -2.3317 | |
| 177 | K | A | -1.9633 | |
| 178 | L | A | 0.1591 | |
| 179 | C | A | -0.9306 | |
| 180 | A | A | -2.0108 | |
| 181 | R | A | -3.5796 | |
| 182 | E | A | -3.9656 | |
| 183 | N | A | -2.3809 | |
| 184 | S | A | -1.6875 | |
| 185 | I | A | -0.6594 | |
| 186 | E | A | -1.1136 | |
| 187 | I | A | 0.6473 | |
| 188 | L | A | 1.0349 | |
| 189 | S | A | 0.3801 | |
| 190 | S | A | 0.1974 | |
| 191 | T | A | 0.8424 | |
| 192 | I | A | 1.6183 | |
| 193 | K | A | -0.5665 | |
| 194 | A | A | 0.0878 | |
| 195 | Y | A | 0.2194 | |
| 196 | N | A | -1.6695 | |
| 197 | A | A | -1.7606 | |
| 198 | E | A | -3.1165 | |
| 199 | N | A | -3.0031 | |
| 200 | N | A | -2.7863 | |
| 201 | G | A | -1.8305 | |
| 202 | G | A | -1.0295 | |
| 203 | M | A | 0.1921 | |
| 204 | S | A | -0.5644 | |
| 205 | A | A | -1.3129 | |
| 206 | E | A | -2.8388 | |
| 207 | E | A | -3.1618 | |
| 208 | E | A | -2.3690 | |
| 209 | I | A | 0.0669 | |
| 210 | G | A | -0.4618 | |
| 211 | P | A | -0.6142 | |
| 212 | G | A | -0.8326 | |
| 213 | A | A | -0.7247 | |
| 214 | E | A | -2.0152 | |
| 215 | P | A | -1.2024 | |
| 216 | M | A | -0.5181 | |
| 217 | R | A | -1.8504 | |
| 218 | G | A | -0.8804 | |
| 219 | P | A | -0.6333 | |
| 220 | S | A | -0.1574 | |
| 221 | L | A | 1.3031 | |
| 222 | A | A | 0.9837 | |
| 223 | T | A | 0.6481 | |
| 224 | Q | A | 0.2234 | |
| 225 | L | A | 1.9827 | |
| 226 | Y | A | 1.9089 | |
| 227 | P | A | 0.9153 | |
| 228 | Y | A | 1.3006 | |
| 229 | D | A | -0.4500 | |
| 230 | V | A | 0.9339 | |
| 231 | P | A | -0.2344 | |
| 232 | D | A | -1.0255 | |
| 233 | Y | A | 0.6400 | |
| 234 | A | A | 0.1889 |